Team:Exeter/lab book/glyco/wk3

From 2012.igem.org

(Difference between revisions)
(Created page with "{{Template:Team:Exeter/e-candi_banner}} <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en"> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> ...")
 
(18 intermediate revisions not shown)
Line 9: Line 9:
<body>
<body>
-
  <table width="1075" border="0" cellpadding="10">
+
  <table width="980" border="0" cellpadding="10">
   
   
  <!--Spacer for Menu Banner-->
  <!--Spacer for Menu Banner-->
Line 20: Line 20:
   <td colspan="2">
   <td colspan="2">
     <div style="text-align:center">
     <div style="text-align:center">
-
     <font face="DokChampa" color="#57b947" size="3">
+
     <font face="Verdana" color="#57b947" size="2">
        
        
-
      <!--Project Division Links-->
+
    <!--Project Division Links-->
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/3gip/wk1"; style="color:#57b947">The 3-Gene Inducible Plasmid</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/proto"; style="color:#57b947">Protocols</a>
-
        &nbsp;|&nbsp;
+
      &nbsp;|&nbsp;
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk1"; style="color:#57b947">Novel Polysaccharide Production</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/1gp/wk1"; style="color:#57b947">Single Gene Plasmids and Enzyme Characterisation</a>
-
        &nbsp;|&nbsp;
+
      &nbsp;|&nbsp;
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/gibs/wk1"; style="color:#57b947">Gibson Assembly</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk1"; style="color:#57b947">Showcasing Polysaccharide Production</a>
-
        &nbsp;|&nbsp;
+
      &nbsp;|&nbsp;
-
      <a href="https://2012.igem.org/Team:Exeter/lab_book/1gp/wk1"; style="color:#57b947">Single Gene Plasmids and Enzyme Characterisation</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/3gip/wk1"; style="color:#57b947">The 3-Gene Inducible Plasmid</a>
-
        <p>
+
      <p>  
-
       <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#57b947">Glycobase</a>
+
      <a href="https://2012.igem.org/Team:Exeter/lab_book/gibs/wk1"; style="color:#57b947">Operon Construction</a>     
-
        </p>
+
       &nbsp;|&nbsp;
 +
      <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#57b947">Glycobase</a>
 +
      </p>
 +
    <!--End Project Division Links-->
 +
 
-
      <!--End Project Division Links-->
 
-
   
 
     </font>
     </font>
     </div>
     </div>
   </td>
   </td>
-
    
+
   </tr>
 +
 
   <tr>
   <tr>
     <td rowspan="2" valign="top" align="center" width="170">
     <td rowspan="2" valign="top" align="center" width="170">
Line 45: Line 48:
     <!--Project Division Week Hyperlinks-->
     <!--Project Division Week Hyperlinks-->
     <div style="text-align:center; width:170">
     <div style="text-align:center; width:170">
-
       <font face="DokChampa" color="#1d1d1b" size="3">
+
       <font face="Verdana" color="#1d1d1b" size="2">
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#1d1d1b">9th - 13th July</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#1d1d1b">25th - 29th June</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk2"; style="color:#1d1d1b">16th - 20th July</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk2"; style="color:#1d1d1b">2nd - 6th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk3"; style="color:#1d1d1b">23rd - 27th July</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk3"; style="color:#1d1d1b">9th - 13th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk4"; style="color:#1d1d1b">30th July - 3rd August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk4"; style="color:#1d1d1b">16th - 20th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk5"; style="color:#1d1d1b">6th - 10th August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk5"; style="color:#1d1d1b">23rd - 27th July</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk6"; style="color:#1d1d1b">13th - 24th August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk6"; style="color:#1d1d1b">30th July - 3rd August</a>
         <p>
         <p>
         -
         -
         </p>
         </p>
-
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk7"; style="color:#1d1d1b">27th - 31st August</a>
+
         <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk7"; style="color:#1d1d1b">6th - 10th August</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk8"; style="color:#1d1d1b">10th - 14th September</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk9"; style="color:#1d1d1b">17th - 21st September</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk10"; style="color:#1d1d1b">24th - 28th September</a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="https://2012.igem.org/Team:Exeter/Results/GlycoBase"; style="color:#e30614"><b>The Database: <font size="3">GlycoBase</font></b></a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="http://glycoweb.com/"; style="color:#e30614" target="_blank"><b>The Result: <font size="3">GlycoWeb</font></b></font></a>
 +
        <p>
 +
        -
 +
        </p>
 +
        <a href="http://sourceforge.net/projects/exe2012ecandi/"; style="color:#e30614" target="_blank"><b><font size="3">Source Code</font></b></font></a>
       </font>
       </font>
     </div>
     </div>
Line 79: Line 106:
   <td width="850" height="250">
   <td width="850" height="250">
   <!------------INSERT WEEKLY IMAGE HERE------------>
   <!------------INSERT WEEKLY IMAGE HERE------------>
-
     <img src="" alt="" title="" width="850" height="250">
+
     <img src="https://static.igem.org/mediawiki/2012/a/ad/Exe2012_lab3.jpg" alt="" title="" width="850" height="250">
   </td>
   </td>
   </tr>
   </tr>
Line 86: Line 113:
   <td valign="top" width="850">
   <td valign="top" width="850">
     <div style="text-align:justify">
     <div style="text-align:justify">
-
     <font face="DokChampa" color="#1d1d1b" size="2">
+
     <font face="Verdana" color="#1d1d1b" size="2">
      
      
-
       <font face="DokChampa" color="#57b947" size="4">
+
       <font face="Verdana" color="#57b947" size="4">
-
       <p><b><u>Glycobase: 23rd - 27th July 2012</u></b></p>
+
       <p><b><u>GlycoBase/GlycoWeb: 9th - 13th July 2012</u></b></p>
       </font>
       </font>
-
     <!------------ENTER LAB BOOK HERE: PLEASE INCLUDE DATES WITHIN THE WEEK------------>  
+
     <p><b>10/07/12</b></p>
 +
<p>Database:</p>
 +
<p>1) Added a variable, failed to loop over items in queryCurs after search. If items are found in queryCurs the error message is printed to console.</p>
 +
<p>2) Could put the whole program in an infinite loop so that the program asks for the next sugar sequence.</p>
 +
<p>3) With regards to accepting an arbitrary number of 'sugars':
 +
</br> - Append each user input to a list
 +
</br> - User input: type q to quit infinite loop
 +
</br> - Call the list 'sugars' and create the conn tuple (2 item) over the indices contained in sugars.
 +
</br> - Run the query for each conn generated.
 +
<p>This will require progressive work</p>
 +
<p>4) Create the database and save it to a file, so it is called each time rather than having to be created.</p><br>
 +
<p><b>11/07/12</b></p>
 +
<p>Completed Python 2.7 Tkinter  GUI tutorial 1 and located module file.</p>
 +
<p>Completed second tutorial on Tk interface and generated a menu bar.
 +
<p>Created buttons for easy navigation.</p>      
      
      
     </font>
     </font>
Line 100: Line 141:
   
   
  </table>
  </table>
 +
 +
<table width="980" align="center" cellspacing="20">
 +
<tr align="center">
 +
  <td>
 +
  <font color="#57B947" size="1" face="Verdana">
 +
    <p><u>Website Designed and Built by: Ryan Edginton, James Lynch & Alex Clowsley</u> &nbsp;&nbsp;|&nbsp;&nbsp;
 +
    <a href="https://igem.org/Team.cgi?id=764" style="color:#57B947" target="_blank"><u>Contact Us</u></a>  &nbsp;&nbsp;|&nbsp;&nbsp;
 +
    <a href="https://2012.igem.org/Team:Exeter/site_map" style="color:#57B947"><u>Site Map</u></a></p>
 +
  </font>
 +
  </td>
 +
</tr>
 +
</table>
</body>
</body>
</html>
</html>

Latest revision as of 00:18, 27 September 2012

ExiGEM2012 Lab Book Glyco wk3

GlycoBase/GlycoWeb: 9th - 13th July 2012

10/07/12

Database:

1) Added a variable, failed to loop over items in queryCurs after search. If items are found in queryCurs the error message is printed to console.

2) Could put the whole program in an infinite loop so that the program asks for the next sugar sequence.

3) With regards to accepting an arbitrary number of 'sugars':
- Append each user input to a list
- User input: type q to quit infinite loop
- Call the list 'sugars' and create the conn tuple (2 item) over the indices contained in sugars.
- Run the query for each conn generated.

This will require progressive work

4) Create the database and save it to a file, so it is called each time rather than having to be created.


11/07/12

Completed Python 2.7 Tkinter GUI tutorial 1 and located module file.

Completed second tutorial on Tk interface and generated a menu bar.

Created buttons for easy navigation.

Website Designed and Built by: Ryan Edginton, James Lynch & Alex Clowsley   |   Contact Us   |   Site Map

Retrieved from "http://2012.igem.org/Team:Exeter/lab_book/glyco/wk3"