Team:Exeter/lab book/novpol/wk6

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      <!--Project Division Links-->
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       <a href="https://2012.igem.org/Team:Exeter/lab_book/1gp/wk1"; style="color:#57b947">Single Gene Plasmids and Enzyme Characterisation</a>
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/proto"; style="color:#57b947">Protocols</a>
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        &nbsp;|&nbsp;
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       &nbsp;|&nbsp;
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk1"; style="color:#57b947">Showcasing Polysaccharide Production</a>
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/1gp/wk1"; style="color:#57b947">Single Gene Plasmids and Enzyme Characterisation</a>
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        &nbsp;|&nbsp;
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      &nbsp;|&nbsp;
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/3gip/wk1"; style="color:#57b947">The 3-Gene Inducible Plasmid</a>
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk1"; style="color:#57b947">Showcasing Polysaccharide Production</a>
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        <p>  
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      &nbsp;|&nbsp;
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/gibs/wk1"; style="color:#57b947">Operon Construction</a>       
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/3gip/wk1"; style="color:#57b947">The 3-Gene Inducible Plasmid</a>
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        &nbsp;|&nbsp;
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      <p>  
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#57b947">Glycobase</a>
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/gibs/wk1"; style="color:#57b947">Operon Construction</a>       
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        </p>
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      &nbsp;|&nbsp;
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      <a href="https://2012.igem.org/Team:Exeter/lab_book/glyco/wk1"; style="color:#57b947">Glycobase</a>
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      </p>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk3"; style="color:#1d1d1b">23rd - 27th July</a>
         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk3"; style="color:#1d1d1b">23rd - 27th July</a>
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        <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk4"; style="color:#1d1d1b">30th July - 3rd August</a>
 
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk6"; style="color:#1d1d1b">13th - 24th August</a>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk6"; style="color:#1d1d1b">13th - 17th August</a>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk7"; style="color:#1d1d1b">27th - 31st August</a>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk7"; style="color:#1d1d1b">20th - 24th August</a>
         <p>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk8"; style="color:#1d1d1b">3rd - 7th September</a>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk8"; style="color:#1d1d1b">27th - 31st August</a>
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         </p>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk9"; style="color:#1d1d1b">10th - 14th September</a>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk9"; style="color:#1d1d1b">3rd - 7th September</a>
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         <a href="https://2012.igem.org/Team:Exeter/lab_book/novpol/wk10"; style="color:#1d1d1b">17th - 21st September</a>
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         <a href="https://2012.igem.org/Team:Exeter/Results/showcase"; style="color:#e30614" target="_blank"><font size="3"><b>Results</b></font></a>
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</font>
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   <td width="810" height="250">
   <!------------INSERT WEEKLY IMAGE HERE------------>
   <!------------INSERT WEEKLY IMAGE HERE------------>
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     <img src="https://static.igem.org/mediawiki/2012/9/9e/Exe2012_aug_13th17th.jpg" alt="" title="" width="810" height="250">
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       <p><b><u>Showcasing Polysaccharide Production: 13th - 24th August 2012</u></b></p>
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       <p><b><u>Showcasing Polysaccharide Production: 13th - 17th August 2012</u></b></p>
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     <!------------ENTER LAB BOOK HERE: PLEASE INCLUDE DATES WITHIN THE WEEK------------>  
     <!------------ENTER LAB BOOK HERE: PLEASE INCLUDE DATES WITHIN THE WEEK------------>  
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     <p>**<b>Monday 13/08/12</b>**</p><br>
 +
 
 +
<p>Added ligation mix of HAS-terminator, cyclodextran-terminator, ompA-SacB and ompA-cyclodextran to Top10 competent <i>E.coli</i> cells and <a href="https://2012.igem.org/Team:Exeter/lab_book/proto/1" style="color:#57b947"><u>transformed</u></a> onto ampicillin plates. </p><br>
 +
<p>**<b>Tuesday 14/08/12</b>**</p><br>
 +
<p><a href="https://2012.igem.org/Team:Exeter/lab_book/proto/2" style="color:#57b947"><u>Transferred</u></a> HAS-terminator, cyclodextran-terminator, ompA-SacB and ompA-cyclodextran to liquid broth containing ampicillin.</p><br>
 +
<p>**<b>Wednesday 15/08/12</b>**</p><br>
 +
<p>Performed <http://www.fermentas.com/templates/files/tiny_mce/coa_pdf/coa_k0502.pdf" style="color:#57b947" target="_blank"><u>mini-prep</u></a> of HAS-terminator, cyclodextran-terminator, ompA-SacB and ompA-cyclodextran. Used the nanodrop machine to confirm nucleic acid present. Digested the fragments and ran them on a gel using electrophoresis. All of the genes were single banded or absent, confirming that the ligation had not worked and only plasmid DNA was present. </p>
 +
<img src="https://static.igem.org/mediawiki/2012/a/a6/Exe2012_inAug_13th17th.jpg" alt="" title="" width="550" height="342">
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<p>Used previous digestion mix of HAS, cyclo, SacB and ompA to attempt ligation again using the <a href="https://2012.igem.org/Team:Exeter/lab_book/proto/4" style="color:#57b947"><u>3A assembly</u></a> protocol, into digested tetracycline plasmids. <a href="https://2012.igem.org/Team:Exeter/lab_book/proto/1" style="color:#57b947"><u>Transformed</u></a> ligation mix into Top10 competent <i>E.coli </i>cells and plated out on tetracycline plates. </p><br>
 +
<p>**<b>Thursday 16/08/12</b>**</p><br>
 +
<p>None of the plates had successfully grown any cultures so stopped lab work for the weekend.</p><br>
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    <p><u>Website Designed and Built by: Ryan Edginton, James Lynch & Alex Clowsley</u> &nbsp;&nbsp;|&nbsp;&nbsp;
 +
    <a href="https://igem.org/Team.cgi?id=764" style="color:#57B947" target="_blank"><u>Contact Us</u></a>  &nbsp;&nbsp;|&nbsp;&nbsp;
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    <a href="https://2012.igem.org/Team:Exeter/site_map" style="color:#57B947"><u>Site Map</u></a></p>
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Latest revision as of 23:58, 26 September 2012

ExiGEM2012 Lab Book NovPol wk6

Showcasing Polysaccharide Production: 13th - 17th August 2012

**Monday 13/08/12**


Added ligation mix of HAS-terminator, cyclodextran-terminator, ompA-SacB and ompA-cyclodextran to Top10 competent E.coli cells and transformed onto ampicillin plates.


**Tuesday 14/08/12**


Transferred HAS-terminator, cyclodextran-terminator, ompA-SacB and ompA-cyclodextran to liquid broth containing ampicillin.


**Wednesday 15/08/12**


Performed mini-prep of HAS-terminator, cyclodextran-terminator, ompA-SacB and ompA-cyclodextran. Used the nanodrop machine to confirm nucleic acid present. Digested the fragments and ran them on a gel using electrophoresis. All of the genes were single banded or absent, confirming that the ligation had not worked and only plasmid DNA was present.

Used previous digestion mix of HAS, cyclo, SacB and ompA to attempt ligation again using the 3A assembly protocol, into digested tetracycline plasmids. Transformed ligation mix into Top10 competent E.coli cells and plated out on tetracycline plates.


**Thursday 16/08/12**


None of the plates had successfully grown any cultures so stopped lab work for the weekend.

Website Designed and Built by: Ryan Edginton, James Lynch & Alex Clowsley   |   Contact Us   |   Site Map

Retrieved from "http://2012.igem.org/Team:Exeter/lab_book/novpol/wk6"