Team:Exeter/lab book/proto/10

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Latest revision as of 23:50, 26 September 2012

Protocol 10

Linearized Plasmid Backbone Digestion and Ligation Protocol
  • For digestion of the linearized plasmid backbone, make an enzyme master-mix of:
    • 5 µL NEB Buffer 2
    • 0.5 µL BSA
    • 0.5 µL EcoRI-HF
    • 0.5 µL PstI
    • 18.5 µL dH20

  • Then add 4µL of linearized plasmid backbone (25ng/µL for 100ng total) into 4µL of enzyme master mix.

  • Digest for 37C/30 min and then heat kill at 80C/20 min.

  • Once heat killed, a ligation mix is made-up containing:
    • 2µl of digested plasmid backbone (25ng)
    • Equimolar amount of EcoRI-HF SpeI digested fragment (< 3 µL)
    • Equimolar amount of XbaI PstI digested fragment (< 3 µL)
    • 1 µL T4 DNA ligase buffer.
    • 0.5 µL T4 DNA ligase
    • Top up solution to 10µL with water

  • Ligate at 16C/30 min and then heat kill at 80C for 20 min.

  • Transform with 1-2µL of product.
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