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Team:Bonn/Project
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| + | This page covers the lab work we did. For other activities which were not part of our experiments with LOV, please take a look at our [[Team:Bonn7Activities|Activities-Page]]! | ||
| - | == | + | == Overall project == |
[[File:AsLOV2-edited.png|200px|thumb|left|LOV structure]] | [[File:AsLOV2-edited.png|200px|thumb|left|LOV structure]] | ||
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== Project Details == | == Project Details == | ||
| - | + | === What we intended to do === | |
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| - | === What we | + | |
In our proof-of-principle, we are coupling LacZalpha to the LOV domain. LacZalpha is one of two parts of a split-version beta-galactosidase, which upon exposure to light will resume galactosidase activity in mutants containing LacZomega, the complimentary second part of beta-galactosidase. Using a chromophore substrate for our beta-galactosidase gives us a simple blue-to-white assay. To show one of the many, wide-ranging possible applications, we will fuse a cell death protein, ccdB, to our LOV construct. Upon light exposure, the cell will go into apoptosis. | In our proof-of-principle, we are coupling LacZalpha to the LOV domain. LacZalpha is one of two parts of a split-version beta-galactosidase, which upon exposure to light will resume galactosidase activity in mutants containing LacZomega, the complimentary second part of beta-galactosidase. Using a chromophore substrate for our beta-galactosidase gives us a simple blue-to-white assay. To show one of the many, wide-ranging possible applications, we will fuse a cell death protein, ccdB, to our LOV construct. Upon light exposure, the cell will go into apoptosis. | ||
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=== The Experiments === | === The Experiments === | ||
| + | For detailed information about the experiments we did in the lab visit our [[Team:Bonn/Notebook|Notebook]]. | ||
| + | == Results == | ||
| - | === | + | === General === |
| - | + | ::TODO | |
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| + | === Biobricks === | ||
::TODO | ::TODO | ||
Revision as of 23:57, 19 September 2012
| Home | Team | Project | Activities | Parts Submitted to the Registry | Notebook | Safety | Attributions | Sponsors |
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This page covers the lab work we did. For other activities which were not part of our experiments with LOV, please take a look at our Activities-Page!
Contents |
Overall project
Control of protein activity at the peptide level offers spatial-temporal control and quick reaction times , but sofar has always involved target-specific tools, such as specific chemical inhibitors or proteases. We are developing and characterizing a fusion construct containing a light sensitive domain that provides quick, universal peptide-level light control of proteins of interest within the framework of easy biobrick-conform coupling.
We are engineering the LOV (Light, Oxygen, Voltage) domain – commonly found in plants where it enables light-directed growth – to control protein activity through blue light. Upon exposure, the LOV domain undergoes a conformational change and shifts away from the protein of interest, uncaging the coupled protein and allowing it to resume activity. In our project, we will couple beta-galactosidase (which offers a simple assay) to the LOV domain as a proof-of-principle. Additionally, we build a cell death device using ccdB, a gyrase inhibitor.
A device of that kind could be of great importance as a tool for disinfection on a laboratory scale or mutant selection via blue light. Further potential applications of our LOV fusion system include bioreactor regulation or site-specific drug activation.
Project Details
What we intended to do
In our proof-of-principle, we are coupling LacZalpha to the LOV domain. LacZalpha is one of two parts of a split-version beta-galactosidase, which upon exposure to light will resume galactosidase activity in mutants containing LacZomega, the complimentary second part of beta-galactosidase. Using a chromophore substrate for our beta-galactosidase gives us a simple blue-to-white assay. To show one of the many, wide-ranging possible applications, we will fuse a cell death protein, ccdB, to our LOV construct. Upon light exposure, the cell will go into apoptosis.
What you can do with it later
Possible uses for this device could encompass e.g. disinfection on a laboratory scale or mutant selection via blue light. Other possible applications of our LOV fusion protein include bioreactor control and regulation or site-specific therapeutic activation of antibody-coupled drugs in a patient's body.
The Experiments
For detailed information about the experiments we did in the lab visit our Notebook.
Results
General
- TODO
Biobricks
- TODO
