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Team:University College London/Module 3/Modelling
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Module 3: Degradation
Description | Design | Construction | Characterisation | Modelling | Results | Conclusions
Modelling
Our gene network model for this module shows the amount of laccase produced by our bacteria. We have used this prediction to find out how many bacteria would be required per cubic meter of sea water in order to effectively degrade polyethylene-based plastics.
| Parameter | Value |
|---|---|
| f.PE+POPex-PEPOPex | Example |
| r.PE+POPEX-PEPOPex | Example |
| f.POPex-POPin | Example |
| r.POPex-POPin | Example |
| f.NahR+POPin-POPinNahR | Example |
| r.NahR+POPin-POPinNahr | Example |
| POPinNahR-Lin+POPinNahR | Example |
| Lin-Lex | Example |
| Lin-Lex | Example |
| f.Null-NahR | Example |
| r.Null-NahR | Example |
| PEPOP+Lex-Lex | Example |
| Species | Initial value | Notes |
|---|---|---|
| PE | Example | |
| POPEX | Example | |
| Lex | Example | |
| PEPOPex | Example | |
| POPin | Dependent on the concentration gradient: when the conc. in is equal to conc. out rate decreases | |
| Nahr | Produced all the time, transcription depends on | |
| POPinNahR | Hill function | |
| Lin | Example |
