"
Team:University College London/Module 2/Characterisation
From 2012.igem.org
Sednanalien (Talk | contribs) (→Characterisation) |
|||
| Line 10: | Line 10: | ||
Besides the expression of curlis, we also want to ascertain the shear resistance of the biofilm formed by the curliated cells. As such, we will also be analysing this by determining the critical shear forces involved in the attachment and detachment of cells from plastic surfaces. We will be doing this with a device modelled on the concept of a LH Fowler Cell Adhesion Measurement Module, which creates a variable shear gradient across the surface of the biofilm, thereby allowing us to ascertain the critical shear stresses at which our cells adhere and detach from the plastic <span class="footnote" title="Shear">surfaces</span>. | Besides the expression of curlis, we also want to ascertain the shear resistance of the biofilm formed by the curliated cells. As such, we will also be analysing this by determining the critical shear forces involved in the attachment and detachment of cells from plastic surfaces. We will be doing this with a device modelled on the concept of a LH Fowler Cell Adhesion Measurement Module, which creates a variable shear gradient across the surface of the biofilm, thereby allowing us to ascertain the critical shear stresses at which our cells adhere and detach from the plastic <span class="footnote" title="Shear">surfaces</span>. | ||
| - | + | The following equation allows us to determine the degree of shear stress our cells are exposed to in our experimental shear device: | |
Revision as of 14:59, 21 September 2012
Description | Design | Construction | Characterisation | Shear Device | Modelling | Results | Conclusions
Characterisation
The characterisation of curli expression will be done via a Congo Red agar assay. Congo Red is a diazo dye that causes cells expressing curlis to be stained red. Hence, Congo Red agar provides a convenient assay to determine if the expression of curlis has been successful.
Besides the expression of curlis, we also want to ascertain the shear resistance of the biofilm formed by the curliated cells. As such, we will also be analysing this by determining the critical shear forces involved in the attachment and detachment of cells from plastic surfaces. We will be doing this with a device modelled on the concept of a LH Fowler Cell Adhesion Measurement Module, which creates a variable shear gradient across the surface of the biofilm, thereby allowing us to ascertain the critical shear stresses at which our cells adhere and detach from the plastic surfaces.
The following equation allows us to determine the degree of shear stress our cells are exposed to in our experimental shear device:
