Team:Trieste/project/applications

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<p class="fancy">
<p class="fancy">
    The safe probiotic constructed here can be used to produce nutritious,
    The safe probiotic constructed here can be used to produce nutritious,
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    preventive or therapeutic molecules. For example, this E.coli can
+
    preventive or therapeutic molecules. For example, this <i> E.coli </i> can
    express antitumorals, antibodies against different intestinal pathogens,
    express antitumorals, antibodies against different intestinal pathogens,
    imunomodulators, antigens (recombinant proteins which act as mucosal
    imunomodulators, antigens (recombinant proteins which act as mucosal
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</br>
</br>
<center>
<center>
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<img src="https://static.igem.org/mediawiki/2012/f/f8/Jojo.png"width="250px"/></center>
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<img src="https://static.igem.org/mediawiki/2012/f/f8/Jojo.png"width="250px"/>
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</center>
</br>
</br>
</p>  
</p>  
<p class="fancy">
<p class="fancy">
    To give a proof-of-concept, we have used our safe probiotic to deliver
    To give a proof-of-concept, we have used our safe probiotic to deliver
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    to gut mucosa a neutralizing antibody (Ab 54,6) against an emerging
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    to gut mucosa a neutralizing antibody (Ab 54.6)<sup><a href="#sup1">[1]</a></sup> against an emerging
    Norovirus (NoV), one of the most common causes of gastroenteritis in the
    Norovirus (NoV), one of the most common causes of gastroenteritis in the
-
    world.<strong> To this end, we used a LPP-OmpA based cell display systemto
+
    world.<strong> To this end, we used a LPP-OmpA based cell display system<sup><a href="#sup2">[2]</a></sup> to
    express the scFv (single chain fragment variable) format of the antibody
    express the scFv (single chain fragment variable) format of the antibody
    attached to the bacterial surface. According to the literature, scFvs
    attached to the bacterial surface. According to the literature, scFvs
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    scFv assumes the right conformation. OmpA portion then introduces itself
    scFv assumes the right conformation. OmpA portion then introduces itself
    into the outer membrane displaying extracellularly its C terminus with
    into the outer membrane displaying extracellularly its C terminus with
-
    the Ab attached on.</br>
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    the Ab attached on.<br/>
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</br>
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<center>
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                    <div style="margin: 3em auto;">
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<img src="https://static.igem.org/mediawiki/2012/2/2e/Scfvts.png"width="450px"/></center>
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                        <img src="https://static.igem.org/mediawiki/2012/3/37/Trieste-Applications.png" alt="Applications"  width="660px"/>
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</br>
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                    </div>
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    <br/>The anti-NoV antibody was also expressed as a SIP
+
 
 +
    <strong>The anti-NoV antibody was also expressed as a SIP
    (Small Immuno Protein) format, which contains the scFv fused to the CH3
    (Small Immuno Protein) format, which contains the scFv fused to the CH3
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    domain of the heavy chain of human immunoglobulin A (IgA). Since the
+
    domain of the heavy chain of human immunoglobulin A (IgA)</strong>. Since the
    CH3 region is able to homodimerize, it should confer bivalent binding
    CH3 region is able to homodimerize, it should confer bivalent binding
    properties to the anti-NoV scFv54.6. Secreted SIPs have the dual advantage
    properties to the anti-NoV scFv54.6. Secreted SIPs have the dual advantage
    of being bivalent as full-length antibodies and being small as scFvs. They
    of being bivalent as full-length antibodies and being small as scFvs. They
    have also been shown to have the potential to protect against enteric
    have also been shown to have the potential to protect against enteric
-
    infections when administered orally (Bestagno et al 2006). Eventually,
+
    infections when administered orally<sup><a href="#sup3">[3]</a></sup>. Eventually,
-
    we planned to produce also the secreted versions of the anti-NoV SIP
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    <strong>we planned to produce also the secreted versions of the anti-NoV SIP
-
    54.6 and of the scFv 54.6. Both the scFv and the SIP sequences were
+
    54.6 and of the scFv 54.6</strong>. Both the scFv and the SIP sequences were
    cloned downstream the pelB leader sequence. PelB drives proteins into the
    cloned downstream the pelB leader sequence. PelB drives proteins into the
    periplasmic space, where it is cleaved off. The resulting proteins can
    periplasmic space, where it is cleaved off. The resulting proteins can
    be released into the extracellular space by passing through porins. This
    be released into the extracellular space by passing through porins. This
    system can also be used for production of small, soluble molecules.
    system can also be used for production of small, soluble molecules.
-
</p>
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<br/>
 +
<br/>
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<center>
 +
<img src="https://static.igem.org/mediawiki/2012/5/5c/Constructstsab.png"width="350px"/></center>
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<br/>
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</p>
 +
<div class="footnotes">
 +
<h3>References</h3>
 +
<p id="sup1">
 +
[1]: <strong>Recombinant norovirus-specific scFv inhibit virus-like particle binding to cellular ligands </strong><br/>
 +
Khalil Ettayebi adn Michele E. Hardy<br/>
 +
Virology Journal, Jan. 2008, 5:21, doi:10.1186/1732-3422X-5-21
 +
</p>
 +
<p id="sup2">
 +
[2]: <strong>Transport and anchoring of beta-lactamase to the external surface of Escherichia coli</strong> <br/>
 +
Joseph A. Francisco, Charles F. Eearhart, and George Georgiou <br/>
 +
Proceedings of the National Academy of Sciences USA, Biochemistry, April 1992, Vol. 89, pp. 2713-2717
 +
</p>
 +
<p id="sup3">
 +
[3]: <strong>An antibody derivative expressed from viral vectors passively immunizes pigs against transmissible gastroenteritis virus infection when supplied orally in crude plant extracts</strong> <br/>
 +
Wendy Monger, Josefa M. Alamillo, Isabel Sola, Yolande Perrin, Marco Bestagno, Oscar R. Burrone, Patricia Sabella, Joan Plana-Duran, Luis Enjuanes, Juan A. Garcia and George P. Lomonossoff <br/>
 +
Plant Biotechnology Journal (2006) 4, pp. 623–631 doi: 10.1111/j.1467-7652.2006.00206.x
 +
</p>
 +
</div>
                 </div>
                 </div>
             </div> <!-- end box_main -->
             </div> <!-- end box_main -->
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                     <li><a href="https://2012.igem.org/Team:Trieste/project">Abstract</a></li>
                     <li><a href="https://2012.igem.org/Team:Trieste/project">Abstract</a></li>
            <li><a href="https://2012.igem.org/Team:Trieste/project/overview">Project Overview</a></li>
            <li><a href="https://2012.igem.org/Team:Trieste/project/overview">Project Overview</a></li>
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    <li><a href="https://2012.igem.org/Team:Trieste/project/applications">Applications</a></li>
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    <li class="select" ><a href="https://2012.igem.org/Team:Trieste/project/applications">Applications</a></li>
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                </ul>
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                    <li><a href="https://2012.igem.org/Team:Trieste/project/modeling">Modeling</a></li>
 +
                    <li><a href="https://2012.igem.org/Team:Trieste/project/mainres">Main Results</a></li>
 +
</ul>
                 <img src="https://static.igem.org/mediawiki/2012/b/b0/Team_trieste.jpg" alt="Team iGEM 2012" id="igem_team" />
                 <img src="https://static.igem.org/mediawiki/2012/b/b0/Team_trieste.jpg" alt="Team iGEM 2012" id="igem_team" />
                 <div class="box_contacts">
                 <div class="box_contacts">
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                     Follow us also:
                     Follow us also:
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                         <a href="https://twitter.com/igemunits" target="_blank"><img src="https://static.igem.org/mediawiki/2012/2/21/Ico_twitter.png" alt="twitter" class="tw" /></a>
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                         <a href="https://twitter.com/iGEMTrieste" target="_blank"><img src="https://static.igem.org/mediawiki/2012/2/21/Ico_twitter.png" alt="twitter" class="tw" /></a>
                     </div>
                     </div>
                 </div>
                 </div>

Latest revision as of 01:31, 27 September 2012

Application

More

The safe probiotic constructed here can be used to produce nutritious, preventive or therapeutic molecules. For example, this E.coli can express antitumorals, antibodies against different intestinal pathogens, imunomodulators, antigens (recombinant proteins which act as mucosal vaccine) which are important for the correct development of the immune system etc. It can express also different enzymes as lactase or enzymes needed to recreate the metabolic pathways to produce nutrients such as vitamins.


To give a proof-of-concept, we have used our safe probiotic to deliver to gut mucosa a neutralizing antibody (Ab 54.6)[1] against an emerging Norovirus (NoV), one of the most common causes of gastroenteritis in the world. To this end, we used a LPP-OmpA based cell display system[2] to express the scFv (single chain fragment variable) format of the antibody attached to the bacterial surface. According to the literature, scFvs anchored to the bacterial surface can bind multiple viral particles and protect efficiently against infection. The chosen scFv sequence, which was already known to inhibit Norovirus (NoV) interaction with cells, was inserted in frame downstream the LPP-OmpA sequence and this construct was cloned under a constitutive promoter. LPP-OmpA is a chimeric sequence having part of the major outer membrane lipoprotein and an outer membrane porin OmpA fragment. This chimeric sequence acts as a leader sequence and an anchor, it transports the scFv fused at its C-terminus through the cytoplasm membrane into the periplasm, where the scFv assumes the right conformation. OmpA portion then introduces itself into the outer membrane displaying extracellularly its C terminus with the Ab attached on.

Applications
The anti-NoV antibody was also expressed as a SIP (Small Immuno Protein) format, which contains the scFv fused to the CH3 domain of the heavy chain of human immunoglobulin A (IgA). Since the CH3 region is able to homodimerize, it should confer bivalent binding properties to the anti-NoV scFv54.6. Secreted SIPs have the dual advantage of being bivalent as full-length antibodies and being small as scFvs. They have also been shown to have the potential to protect against enteric infections when administered orally[3]. Eventually, we planned to produce also the secreted versions of the anti-NoV SIP 54.6 and of the scFv 54.6. Both the scFv and the SIP sequences were cloned downstream the pelB leader sequence. PelB drives proteins into the periplasmic space, where it is cleaved off. The resulting proteins can be released into the extracellular space by passing through porins. This system can also be used for production of small, soluble molecules.


References

[1]: Recombinant norovirus-specific scFv inhibit virus-like particle binding to cellular ligands
Khalil Ettayebi adn Michele E. Hardy
Virology Journal, Jan. 2008, 5:21, doi:10.1186/1732-3422X-5-21

[2]: Transport and anchoring of beta-lactamase to the external surface of Escherichia coli
Joseph A. Francisco, Charles F. Eearhart, and George Georgiou
Proceedings of the National Academy of Sciences USA, Biochemistry, April 1992, Vol. 89, pp. 2713-2717

[3]: An antibody derivative expressed from viral vectors passively immunizes pigs against transmissible gastroenteritis virus infection when supplied orally in crude plant extracts
Wendy Monger, Josefa M. Alamillo, Isabel Sola, Yolande Perrin, Marco Bestagno, Oscar R. Burrone, Patricia Sabella, Joan Plana-Duran, Luis Enjuanes, Juan A. Garcia and George P. Lomonossoff
Plant Biotechnology Journal (2006) 4, pp. 623–631 doi: 10.1111/j.1467-7652.2006.00206.x

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