http://2012.igem.org/wiki/index.php?title=Team:Tec-Monterrey_EKAM/Software&feed=atom&action=history
Team:Tec-Monterrey EKAM/Software - Revision history
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http://2012.igem.org/wiki/index.php?title=Team:Tec-Monterrey_EKAM/Software&diff=298684&oldid=prev
PedroC at 04:03, 27 October 2012
2012-10-27T04:03:24Z
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<td colspan='2' style="background-color: white; color:black;">Revision as of 04:03, 27 October 2012</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> As a tool for the implementation of this construct design strategy, a software application was developed to aid in the appropriate consideration and placing of restriction sites in the master molecule, enabling a simultaneous consideration of the multiple factors affecting the efficiency of the final design. Enzyme compatibility, including digestion reaction conditions and cohesive end affinity, as well as their availability and other characteristics, are taken into account as the user points out the limits they wish to define for each module, so a future manipulation of the fragment can be carried out with as little enzyme as possible. </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> As a tool for the implementation of this construct design strategy, a software application was developed to aid in the appropriate consideration and placing of restriction sites in the master molecule, enabling a simultaneous consideration of the multiple factors affecting the efficiency of the final design. Enzyme compatibility, including digestion reaction conditions and cohesive end affinity, as well as their availability and other characteristics, are taken into account as the user points out the limits they wish to define for each module, so a future manipulation of the fragment can be carried out with as little enzyme as possible. </div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> <br/></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div> <ins class="diffchange diffchange-inline"><br/></ins><br/></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> To aid in the generation of modular restriction sites in the master molecule. Multiple factors can be considered toward enzyme compatibility, including:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> To aid in the generation of modular restriction sites in the master molecule. Multiple factors can be considered toward enzyme compatibility, including:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><br/>• Digestion reaction conditions</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><br/>• Digestion reaction conditions</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><br/>• Other characteristics</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><br/>• Other characteristics</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><br/>The user points out the limits they wish to define for each module, so future manipulation is possible with optimal enzyme use.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><br/>The user points out the limits they wish to define for each module, so future manipulation is possible with optimal enzyme use.</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><br/><br/></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">The software can be accessed <a href="http://nerv.com.mx/ekam_sw/" target="_blank">here</a> (opens in a new window).</ins></div></td></tr>
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PedroC
http://2012.igem.org/wiki/index.php?title=Team:Tec-Monterrey_EKAM/Software&diff=296888&oldid=prev
Nikiole91 at 03:06, 27 October 2012
2012-10-27T03:06:29Z
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<td colspan='2' style="background-color: white; color:black;">Revision as of 03:06, 27 October 2012</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> </li></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> </li></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Parts" >Parts</a></li> </div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Parts" >Parts</a></li> </div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> <li><a href="Team:Tec-Monterrey_EKAM/Notebook" >Notebook</a></li></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div> <li><a href="<ins class="diffchange diffchange-inline">/</ins>Team:Tec-Monterrey_EKAM/Notebook" >Notebook</a></li></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> <li><a href="Team:Tec-Monterrey_EKAM/Gallery" >Gallery</a></li></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div> <li><a href="<ins class="diffchange diffchange-inline">/</ins>Team:Tec-Monterrey_EKAM/Gallery" >Gallery</a></li></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Safety" >Safety</a></li></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Safety" >Safety</a></li></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Sponsors" >Sponsors</a></li></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Sponsors" >Sponsors</a></li></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Attributions" >Attributions</a></li> <del class="diffchange diffchange-inline"> </del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div> <li><a href="/Team:Tec-Monterrey_EKAM/Attributions" >Attributions</a></li> <ins class="diffchange diffchange-inline"> </ins></div></td></tr>
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Nikiole91
http://2012.igem.org/wiki/index.php?title=Team:Tec-Monterrey_EKAM/Software&diff=296494&oldid=prev
Nikiole91 at 02:49, 27 October 2012
2012-10-27T02:49:14Z
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Nikiole91
http://2012.igem.org/wiki/index.php?title=Team:Tec-Monterrey_EKAM/Software&diff=296475&oldid=prev
Nikiole91 at 02:48, 27 October 2012
2012-10-27T02:48:26Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <!---------------------></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div> <!---------------------></div></td></tr>
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Nikiole91
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<span class="safety_question">Software</span><br />
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As a tool for the implementation of this construct design strategy, a software application was developed to aid in the appropriate consideration and placing of restriction sites in the master molecule, enabling a simultaneous consideration of the multiple factors affecting the efficiency of the final design. Enzyme compatibility, including digestion reaction conditions and cohesive end affinity, as well as their availability and other characteristics, are taken into account as the user points out the limits they wish to define for each module, so a future manipulation of the fragment can be carried out with as little enzyme as possible. <br />
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To aid in the generation of modular restriction sites in the master molecule. Multiple factors can be considered toward enzyme compatibility, including:<br />
<br/>• Digestion reaction conditions<br />
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<br/>The user points out the limits they wish to define for each module, so future manipulation is possible with optimal enzyme use.<br />
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