Team:KAIT Japan/Notebook

From 2012.igem.org

(Difference between revisions)
Line 14: Line 14:
'''During the creation.'''<br>
'''During the creation.'''<br>
-
'''Creating parts of Tar methylation region.'''
+
=Creating parts of Tar methylation region.=
==Date:8/9==
==Date:8/9==
===Colony PCR===
===Colony PCR===
Line 53: Line 53:
#*50cycle
#*50cycle
#Storage
#Storage
 +
----
----
 +
 +
==Date:8/13==
 +
===Confirmed of electrophoresis by PCR products and Ligation of the TA vector===
 +
#Electrophoresis
 +
#Check and Colony PCR
 +
#Add to TA vector
 +
#*PCR products 2μL
 +
#*pMD20-Tvector 1μL
 +
#*D2W 2μL
 +
#*Ligation Mighty Mix 5μL
 +
#Cold storage(16℃,30min)
 +
#Storage(-20℃)

Revision as of 02:59, 14 August 2012

KAIT_Japan_Rogo2mini.png

Home Team Project Parts Attributions Notebook Safety Sitemap


During the creation.

Contents

Creating parts of Tar methylation region.

Date:8/9

Colony PCR

Reagent

  • TaKaRa Ex Taq(5units/μL) 0.5μL
  • 10×Ex Taq buffer 10μL
  • dNTP Mixture(2.5Meach) 8μL
  • Primer F(10μM) 4μL
  • Primer R(10μM) 4μL
  • Template(E.coli DH5α)

→Reflection:We Took E.coli too many.You should take less E.coli.
Conditions of the thermal cycler

  1. 95℃(5min)
  2. 94℃(30sec)
  3. 61℃(30sec)
  4. 71℃(40sec)
  5. 72℃(1min)
  6. 4℃(Save)
    • 2~4:35cycle→Reflection:The number of cycles was less.So,We increased The number of cycles in 8/11.(50 cycles)

Date:8/11

The purified DNA

  1. Electrophoresis
    • Marker:pigment(buffer) 1μL,DNA molecule 2μL,TE buffer 3μL
    • Sample:pigment(buffer) 1μL,sample 5μL
    • Gel concentration:1.2%,Migration time:30min

→Reflection:Band was less.

  1. Storage

PCR Production

  1. Electrophoresis
    • The gel check and cut
  2. DNA purification
  3. Confirmation of electrophoresis
  4. PCR
    • 50cycle
  5. Storage

Date:8/13

Confirmed of electrophoresis by PCR products and Ligation of the TA vector

  1. Electrophoresis
  2. Check and Colony PCR
  3. Add to TA vector
    • PCR products 2μL
    • pMD20-Tvector 1μL
    • D2W 2μL
    • Ligation Mighty Mix 5μL
  4. Cold storage(16℃,30min)
  5. Storage(-20℃)