Team:Johns Hopkins-Software

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<img height="300px" src="https://static.igem.org/mediawiki/2012/f/fd/Autogenelogo_plasmid_bw.png">
 
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A cloud-based tool for plasmid annotation and design
 
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stuff
 
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<a href="index.html"><img width=74.1%; src="https://static.igem.org/mediawiki/2012/0/09/AutogeneHeader.png"></a><a class="returnLink" title="Return to iGem" href="https://igem.org"></a>
 
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<li><a href="#">the Software</a>
 
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                  <ul>
 
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  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Members">Overview</a></li>
 
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                  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Members">Screencast</a></li>
 
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  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Acknowledgements">Cloud</a></li>
 
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  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Advisors">Database</a></li>
 
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                <li><a href="#">the Team</a>
 
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  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Members">Members</a></li>
 
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                  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Members">Advisors</a></li>
 
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  <li><a href="https://2011.igem.org/Team:Johns_Hopkins/Team/Acknowledgements">Attributions</a></li>
 
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<li><a href="#">Human Practices</a>
 
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<li><a href="#">Medal Fulfillment</a>
 
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<li><a href="#">Safety</a>
 
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<div style="position: relative; left: 0px; top: 0px;"><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/AutoPlasmid"><img style="border: 0;" width="130px" src="https://static.igem.org/mediawiki/2012/5/5a/Plasmidicon.png"></a></div>
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<div style="width:150px; position: relative; top: -155px; left: 140px; width: 125px; "><font color="white" size="+1"><br><b>AutoPlasmid</b><br></font><font color="white">AutoPlasmid is a module meant to simplify the process of plasmid annotation and visualization.</font></div>
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<div style="position: absolute; left: 290px; top: 0px;"><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/AutoDesign"><img  width="130px" style="border: 0;" src="https://static.igem.org/mediawiki/2012/4/42/Designicon.png"></a></div>
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<div style="width:130px; position: absolute; top: -25px; left:430px; width: 125px"><font color="white" size="+1"><b><br>AutoDesign</b></font><font color="white"><br>AutoDesign allows a user to create their own sequences from features from the Autogene database, and from custom features.</font></div>
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<div style="position: absolute; left: 580px; top: 0px;"><a href="http://www.ugrad.cs.jhu.edu/~eisinger/iGEM/Screencast.mov"><img  width = "130px" style="border: 0;" src="https://static.igem.org/mediawiki/2012/2/24/Screencasticon.png"></a></div>
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<div style="width:200px; position: absolute; top: -25px; left:720px; width: 125px"><font color="white" size="+1"><font color="white" size="+1"><br><b>Screencast</b><br></font></font><font color="white">Learn how to use Autogene by watching our screencast.</font></div>
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<div style="position: absolute; left: 0px; top: 170px;"><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Cloud"><img  style="border: 0;" width="130" src="https://static.igem.org/mediawiki/2012/9/92/Cloudicon.png"></a></div>
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<div style="width:200px; position: absolute; top: 167px; left: 140px; width: 120px; "><font color="white" size="+1"><b>Cloud<br></b></font><font color="white">Autogene harnesses the power of cloud computing to greatly increase alignment speed, without sacrificing accuracy.</font></div>
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<div style="position: absolute; left: 290px; top: 170px;"><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Compatibility"><img  width = "130px" style="border: 0;" src="https://static.igem.org/mediawiki/2012/b/b3/Compatibilityicon.png"></a></div>
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<div style="width:200px; position: absolute; top: 167px; left:430px; width: 120px"><font color="white" size="+1"><b>Compatibility</b><br></font><font color="white">Autogene is compatible with many other synthetic biology software tools, and can handle many file formats.</font></div>
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<div style="position: absolute; left: 580px; top: 170px;"><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/PathogenDetection"><img  style="border: 0;" src="https://static.igem.org/mediawiki/2012/9/9d/Humanpracticesicon.png" width="130px"></a></div>
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<div style="width:200px; position: absolute; top: 167px; left: 720px; width: 120px; "><font color="white" size="+1"><b>Applications</b><br></font><font color="white">Using our software tools, we analyze the BioBrick registry.</font></div>
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Latest revision as of 02:48, 27 October 2012


AutoPlasmid
AutoPlasmid is a module meant to simplify the process of plasmid annotation and visualization.

AutoDesign
AutoDesign allows a user to create their own sequences from features from the Autogene database, and from custom features.

Screencast
Learn how to use Autogene by watching our screencast.
Cloud
Autogene harnesses the power of cloud computing to greatly increase alignment speed, without sacrificing accuracy.
Compatibility
Autogene is compatible with many other synthetic biology software tools, and can handle many file formats.
Applications
Using our software tools, we analyze the BioBrick registry.















































































Autogene

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