Team:Grenoble/Biology/Protocols/Transformation 2

From 2012.igem.org

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     <h2>Protocol</h2>
     <h2>Protocol</h2>
Following are the instructions from the
Following are the instructions from the
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<a href="http://openwetware.org/wiki/Transforming_chemically_competent_cells">OpenWetWare website</a>.
+
<a href="http://openwetware.org/wiki/Transforming_chemically_competent_cells" target="blank">OpenWetWare website</a>.
<br/>
<br/>
<br/>
<br/>
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     <br/>
     <br/>
     <center>
     <center>
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         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
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                 <tr><td><div class="petit">To prevent the ice conrainer from falling off the workbench, it is
+
                 <tr><td><div class="petit">To prevent the ice container from falling off the workbench, it is
                 recommended to place it away from edges. In addition, it is better to put eppendorfs in a special rack.  
                 recommended to place it away from edges. In addition, it is better to put eppendorfs in a special rack.  
-
It is important to know where manipulations will be achieved in order to apprehend the possible risks.  
+
It is important to know where manipulations will be achieved in order to apprehend the possible risks.</div></td></tr>
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</div></td></tr>
+
         </table>
         </table>
     </center>
     </center>
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">Using the -80°C freezer requires to wear special gloves
                 <tr><td><div class="petit">Using the -80°C freezer requires to wear special gloves
                 which protect against frostbite. Moreover ice melts, therefore it is also important to be careful
                 which protect against frostbite. Moreover ice melts, therefore it is also important to be careful
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">During this step, cells are manipulated. It is thus necessary
                 <tr><td><div class="petit">During this step, cells are manipulated. It is thus necessary
                 to work in the sterile environment provided by the flow hood.</div></td></tr>
                 to work in the sterile environment provided by the flow hood.</div></td></tr>
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">It is important to know how a device works before using it.  
                 <tr><td><div class="petit">It is important to know how a device works before using it.  
-
The heating block takes a long time before reaching a defined temperature. Therefore,
+
The heating block takes a long time before reaching a defined temperature. Therefore,
                 it is recommended to switch it on a while before you need it. It is possible to accelerate the temperature increase by setting the device to
                 it is recommended to switch it on a while before you need it. It is possible to accelerate the temperature increase by setting the device to
-
a higher temperature than the one required. Of course it has to be set to 42°C. In case the protocol requires a higher, the
+
a higher temperature than the one required. Of course it has to be set to 42∞C. In case the protocol requires a higher, the
                 users must be careful of the electric cables. They must not touch the hot spot of the device.
                 users must be careful of the electric cables. They must not touch the hot spot of the device.
                 Users must also not forget to stop the device once it is not needed any further.</div></td></tr>
                 Users must also not forget to stop the device once it is not needed any further.</div></td></tr>
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">Make sure that the eppendorfs are closed.</div></td></tr>
                 <tr><td><div class="petit">Make sure that the eppendorfs are closed.</div></td></tr>
         </table>
         </table>
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">This has to be done in a sterile area.</div></td></tr>
                 <tr><td><div class="petit">This has to be done in a sterile area.</div></td></tr>
         </table>
         </table>
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">This has to be done in a sterile environment.</div></td></tr>
                 <tr><td><div class="petit">This has to be done in a sterile environment.</div></td></tr>
         </table>
         </table>
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     <br/>
     <br/>
     <center>
     <center>
-
         <table>
+
         <table class="tableau">
-
                 <tr><th><i><div class="petit">SAFETY AND USEFUL RECOMMANDATION</div></i></th></tr>
+
                 <tr><th><i><div class="petit"><center>SAFETY AND USEFUL RECOMMANDATION</center></div></i></th></tr>
                 <tr><td><div class="petit">When leaving devices on working devices in the laboratory, users
                 <tr><td><div class="petit">When leaving devices on working devices in the laboratory, users
                 must tell the person in charge of the laboratory. In addition, they must place a note on the device in
                 must tell the person in charge of the laboratory. In addition, they must place a note on the device in

Latest revision as of 08:22, 25 September 2012

iGEM Grenoble 2012

Project

Transformation of E. coli competent cells (heat shock)

Goal

Transform E. coli competent cells with foreign DNA.

Protocol

Following are the instructions from the OpenWetWare website.

  1. Prepare ice containers.

  2. SAFETY AND USEFUL RECOMMANDATION
    To prevent the ice container from falling off the workbench, it is recommended to place it away from edges. In addition, it is better to put eppendorfs in a special rack. It is important to know where manipulations will be achieved in order to apprehend the possible risks.

  3. Thaw TSS E. coli competent cells (from the freezer) on ice.

  4. SAFETY AND USEFUL RECOMMANDATION
    Using the -80°C freezer requires to wear special gloves which protect against frostbite. Moreover ice melts, therefore it is also important to be careful not to place the iced object near electric devices. There is a risk of electrocution.

  5. Add DNA, pipette gently to mix (1 µL of prepped plasmid is more than enough).

  6. SAFETY AND USEFUL RECOMMANDATION
    During this step, cells are manipulated. It is thus necessary to work in the sterile environment provided by the flow hood.

  7. Let sit for 30 minutes on ice.

  8. Set the heating block at 42°C.

  9. SAFETY AND USEFUL RECOMMANDATION
    It is important to know how a device works before using it. The heating block takes a long time before reaching a defined temperature. Therefore, it is recommended to switch it on a while before you need it. It is possible to accelerate the temperature increase by setting the device to a higher temperature than the one required. Of course it has to be set to 42∞C. In case the protocol requires a higher, the users must be careful of the electric cables. They must not touch the hot spot of the device. Users must also not forget to stop the device once it is not needed any further.

  10. Incubate cells for 30 seconds at 42°C.

  11. SAFETY AND USEFUL RECOMMANDATION
    Make sure that the eppendorfs are closed.

  12. Incubate cells on ice for 2 min.

  13. Add 1 mL of LB medium at room temperature.

  14. SAFETY AND USEFUL RECOMMANDATION
    This has to be done in a sterile area.

  15. Incubate for 1 hour at 37°C on shaker.

  16. Spread 100-300 µL onto a plate complemented with appropriate antibiotic.

  17. SAFETY AND USEFUL RECOMMANDATION
    This has to be done in a sterile environment.

  18. Grow overnight at 37°C.

  19. SAFETY AND USEFUL RECOMMANDATION
    When leaving devices on working devices in the laboratory, users must tell the person in charge of the laboratory. In addition, they must place a note on the device in order to inform the personnal of the laboratory that an experiment is in progress.