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Team:Calgary/Project/References - Revision history
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http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=299311&oldid=prev
Pjwu at 04:25, 17 December 2012
2012-12-17T04:25:22Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>German Collection of Microorganisms and Cell Cultures (DSMZ): Nocardia iowensis. <a href="https://www.dsmz.de/catalogues/details/culture/DSM-45197.html">http://www.dsmz.de/catalogues/details/culture/DSM-45197.html</a></li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>German Collection of Microorganisms and Cell Cultures (DSMZ): Nocardia iowensis. <a href="https://www.dsmz.de/catalogues/details/culture/DSM-45197.html">http://www.dsmz.de/catalogues/details/culture/DSM-45197.html</a></li><br></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Groisman EA. The Pleiotropic Two-Component Regulatory System PhoP-PhoQ. J. Bacteriol. 2001 Mar; 183 (6): 1835-42</li><br></ins></div></td></tr>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><li>Gopinath AV, Russell D. An Inexpensive Field-Portable Programmable Potentiostat. Chem. Educator.2006 July;11:23-28.</li><<del class="diffchange diffchange-inline">/</del>br></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><li>Gopinath AV, Russell D. An Inexpensive Field-Portable Programmable Potentiostat. Chem. Educator.2006 July;11:23-28.</li><br></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Harayama S, Rekik M, Wasserfallen A and Bairoch A. Evolutionary relationships between catabolic pathways for aromatics: conservation of gene order and nucleotide sequences of catechol oxidation genes of pWW0 and NAH7 plasmids. MGG Mol Gen.Genet.1987; 210(2): 241–247.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Harayama S, Rekik M, Wasserfallen A and Bairoch A. Evolutionary relationships between catabolic pathways for aromatics: conservation of gene order and nucleotide sequences of catechol oxidation genes of pWW0 and NAH7 plasmids. MGG Mol Gen.Genet.1987; 210(2): 241–247.</li><br></div></td></tr>
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Pjwu
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=296311&oldid=prev
Cqian at 02:41, 27 October 2012
2012-10-27T02:41:08Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Timms-Wilson TM, Bailey MJ. Reliable use of green fluorescent protein in fluorescent pseudomonads. J Microbiol Methods 2001 Jul 30;46(1):77-80. </li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Timms-Wilson TM, Bailey MJ. Reliable use of green fluorescent protein in fluorescent pseudomonads. J Microbiol Methods 2001 Jul 30;46(1):77-80. </li><br></div></td></tr>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;"><li>TOMLAB Optimization, MatLab Optimization. <a href="http://tomopt.com/tomlab/">http://tomopt.com/tomlab/</a> </li><br></del></div></td><td colspan="2"> </td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>United Nations Environment Programme: Sulfur Air Pollution. <a href="http://www.unep.org/transport/pcfv/pdf/Ethiopia-AirPollutionsulphur.pdf">http://www.unep.org/transport/pcfv/pdf/Ethiopia-AirPollutionsulphur.pdf </a> </li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>United Nations Environment Programme: Sulfur Air Pollution. <a href="http://www.unep.org/transport/pcfv/pdf/Ethiopia-AirPollutionsulphur.pdf">http://www.unep.org/transport/pcfv/pdf/Ethiopia-AirPollutionsulphur.pdf </a> </li><br></div></td></tr>
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Cqian
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=296141&oldid=prev
Kevinm.huie at 02:28, 27 October 2012
2012-10-27T02:28:26Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Behar FH, Albrecht P. Correlations between carboxylic acids and hydrocarbons in several crude oils alteration by biodegradation. Org Geochem 1984;6:597-604. </li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Behar FH, Albrecht P. Correlations between carboxylic acids and hydrocarbons in several crude oils alteration by biodegradation. Org Geochem 1984;6:597-604. </li><br></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Bergman L. Growth and maintenance of yeast. Methods in Molecular Biology. 2001May; 177: 9-39.</li><br></ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Biran I, Levcov K, Hengge-Aronis R, Ron EZ, Rishpon J. On-line monitoring of gene expression. Microbiology.1999 April;145:2129-2133.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Biran I, Levcov K, Hengge-Aronis R, Ron EZ, Rishpon J. On-line monitoring of gene expression. Microbiology.1999 April;145:2129-2133.</li><br></div></td></tr>
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Kevinm.huie
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=295834&oldid=prev
Kevinm.huie at 02:18, 27 October 2012
2012-10-27T02:18:19Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Asenjo JA. (1949). Bioreactor system design. New York (NY): Marcel Dekker Inc.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Asenjo JA. (1949). Bioreactor system design. New York (NY): Marcel Dekker Inc.</li><br></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, and Mori H. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2006 Feb;1-11.</li><br></ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Becker SA, Feist AM, Mo ML, Hannum G, Palsson BØ, Herrgard MJ. Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox. Nature Protocols 2 2007 Mar; 727-723.</li></br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Becker SA, Feist AM, Mo ML, Hannum G, Palsson BØ, Herrgard MJ. Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox. Nature Protocols 2 2007 Mar; 727-723.</li></br></div></td></tr>
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Kevinm.huie
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=294506&oldid=prev
Jeffaddison89 at 01:26, 27 October 2012
2012-10-27T01:26:30Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Ma T. The Desulfurization Pathway in <i>Rhodococcus</i>. Microbiology Monographs 2010; 16: 207-230.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Ma T. The Desulfurization Pathway in <i>Rhodococcus</i>. Microbiology Monographs 2010; 16: 207-230.</li><br></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Mayaux JF, Cerbelaud E, Soubrier F, Yeh P, Blanche F, Petre D. Purification, Cloning, and Primary Structure of a New Enantiomer-Selective Amidase from a Rhodococcus Strain: Structural Evidence for a Conserved Genetic Coupling with Nitrile Hydratase. J Bacteriology Nov. 1991; 173(21): 6694-6704. </li><br></ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Morales M, Le Borgne S. Microorganisms Utilizing Nitrogen-Containing Heterocyclic Hydrocarbons. Handbook of Hydrocarbon and Lipid Microbiology: 2144-2157. Springer, 2010.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Morales M, Le Borgne S. Microorganisms Utilizing Nitrogen-Containing Heterocyclic Hydrocarbons. Handbook of Hydrocarbon and Lipid Microbiology: 2144-2157. Springer, 2010.</li><br></div></td></tr>
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Jeffaddison89
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=293742&oldid=prev
Jeffaddison89 at 00:57, 27 October 2012
2012-10-27T00:57:28Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Kamali N, Tavallaie M, Bambai B, Karkhane AA, Miri M. Site-directed mutagenesis enhances the activity of NADH-FMN oxidoreductase (DszD) activity of <i>Rhodococcus erythropolis</i>. Biotechnol Lett. 2010; 32: 921-927</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Kamali N, Tavallaie M, Bambai B, Karkhane AA, Miri M. Site-directed mutagenesis enhances the activity of NADH-FMN oxidoreductase (DszD) activity of <i>Rhodococcus erythropolis</i>. Biotechnol Lett. 2010; 32: 921-927</li><br></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Kanehisa Laboratories. KEGG pathway: Benzoic acid family-reference pathway. 2010. http://www.genome.jp/kegg/pathway/map/map07110.html </li><br></ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Katzer JR, Sivasubramanian R. Process and Catalyst Needs for Hydrodenitrogenation. Catalysis Reviews: Science and Engineering 1979; 20(2):155-208. </li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Katzer JR, Sivasubramanian R. Process and Catalyst Needs for Hydrodenitrogenation. Catalysis Reviews: Science and Engineering 1979; 20(2):155-208. </li><br></div></td></tr>
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Jeffaddison89
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=293672&oldid=prev
Jeffaddison89 at 00:53, 27 October 2012
2012-10-27T00:53:55Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Herman DC, Fedorak PM, MacKinnon MD, Costerton JW. Biodegradation of naphthenic acids by microbial populations indigenous to oil sands tailings. Can J Microbiol 1994 Jun;40(6):467-477.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Herman DC, Fedorak PM, MacKinnon MD, Costerton JW. Biodegradation of naphthenic acids by microbial populations indigenous to oil sands tailings. Can J Microbiol 1994 Jun;40(6):467-477.</li><br></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Hirrlinger B, Stolz A, Knackmuss HJ. Purification and properties of an amidase from Rhodococcus erythropolis MP50 which enantioselectively hydrolyzes 2-arylpropionamides. J Bacteriology 1996; 178(12) 3501-3507.</li><br></ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Holowenko FM, Mackinnon MD, Fedorak PM. Naphthenic acids and surrogate naphthenic acids in methanogenic microcosms. Water Res 2001 Aug;35(11):2595-2606. </li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Holowenko FM, Mackinnon MD, Fedorak PM. Naphthenic acids and surrogate naphthenic acids in methanogenic microcosms. Water Res 2001 Aug;35(11):2595-2606. </li><br></div></td></tr>
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Jeffaddison89
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=291895&oldid=prev
Lisa.O at 23:22, 26 October 2012
2012-10-26T23:22:58Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>He A, Li T, Daniels L, Fotheringham I, Rosazza J.P.N. Nocardia sp. Carboxylic Acid Reductase: Cloning, Expression, and Characterization of a New Aldehyde Oxidoreductase Family. Applied and Environmental Microbiology 2004 Mar;70(3):1874–1881.</li><br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>He A, Li T, Daniels L, Fotheringham I, Rosazza J.P.N. Nocardia sp. Carboxylic Acid Reductase: Cloning, Expression, and Characterization of a New Aldehyde Oxidoreductase Family. Applied and Environmental Microbiology 2004 Mar;70(3):1874–1881.</li><br></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Helmann J. Measuring metals with RNA. J Mol Cell 2007 Sept 21; 27(6) 859-860. </li></br></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><li>Helmann J. Measuring metals with RNA. J Mol Cell 2007 Sept 21; 27(6) 859-860. </li></br></div></td></tr>
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Lisa.O
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=291850&oldid=prev
Myarcell at 23:20, 26 October 2012
2012-10-26T23:20:21Z
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><li>Knudsen S, Saadbye P, Hansen LH, Collier A, Jacobsen BL, Schlundt J, Karlstrom OH. Development and testing of improved suicide functions for biological containment of bacteria. Appl Environ Microbiol 1995 Mar; 61(3):985-991.</li><br></ins></div></td></tr>
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Myarcell
http://2012.igem.org/wiki/index.php?title=Team:Calgary/Project/References&diff=268170&oldid=prev
Yqi2011 at 04:00, 4 October 2012
2012-10-04T04:00:33Z
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><li>German Collection of Microorganisms and Cell Cultures (DSMZ): Nocardia iowensis. <a href="https://www.dsmz.de/catalogues/details/culture/DSM-45197.html"><del class="diffchange diffchange-inline">https</del>://www.dsmz.de/catalogues/details/culture/DSM-45197.html</a></li><br></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><li>German Collection of Microorganisms and Cell Cultures (DSMZ): Nocardia iowensis. <a href="https://www.dsmz.de/catalogues/details/culture/DSM-45197.html"><ins class="diffchange diffchange-inline">http</ins>://www.dsmz.de/catalogues/details/culture/DSM-45197.html</a></li><br></div></td></tr>
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