Team:CBNU-Korea/Project

From 2012.igem.org

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<p>
We have developed two distinct software tools. <br> <br>
We have developed two distinct software tools. <br> <br>
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The first tool, brick-designer, user can design new bio-bricks. It
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The first tool is Brick Designer. With this, users can design new
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is also able to synthesize bricks by using the bricks registered
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bio-bricks. It is also able to synthesize bio-bricks by using the
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in partsregistry. User can also utilize bricks he just designed.
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bricks whitch are registered in partsregistry. Users can also
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We tried to enhance software potability by enabling the bricks to
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utilize bricks he just designed. We tried to enhance software
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save as Genbank and SBOL types. Brick also can be saved as picture
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potability by enabling the designed bricks to save as Genbank and
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file so that it is helpful in the Wiki implementation.<br> <br>
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SBOL format. Brick also can be saved as picture file so that it is
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helpful in the Wiki implementation.<br> <br> Second tool,
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With the second tool,MG-designer, is functionally divided into
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Minimal Genome Designer is functionally divided into two program,
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designer and viewer. The viewer shows the information of genomes
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Designer and Viewer. The Viewer shows a lot of information of
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in both linear and circular form. So it is easier for users to
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genomes and genes. For example, Location of essential genes and the
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understand the characteristic of genomes. By the designer, user
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function of genes. It also provides information of genomes in both
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can design minimal genomes by essential genes which are analogized
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linear and circular form. Using this, it will be easier for users
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by our team in this year. The minimal genome can be designed
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to understand the characteristic of genomes. By the designer, user
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depending on characteristics of species by inserting the function
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can design minimal genomes by essential genes which are predicted
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of genes into particular locations.
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by our team in this year. It shows the information of essential
 +
genes that can exist in eash section like frequency of location on
 +
82 species, function and etc. When it is done to design minimal
 +
genome, it can be viewed on Viewer.
</p>
</p>

Revision as of 11:36, 26 September 2012

PROJECT

- Overview

BUGS - Brick & Unique minimal Genome Software

We have developed two distinct software tools.

The first tool is Brick Designer. With this, users can design new bio-bricks. It is also able to synthesize bio-bricks by using the bricks whitch are registered in partsregistry. Users can also utilize bricks he just designed. We tried to enhance software potability by enabling the designed bricks to save as Genbank and SBOL format. Brick also can be saved as picture file so that it is helpful in the Wiki implementation.

Second tool, Minimal Genome Designer is functionally divided into two program, Designer and Viewer. The Viewer shows a lot of information of genomes and genes. For example, Location of essential genes and the function of genes. It also provides information of genomes in both linear and circular form. Using this, it will be easier for users to understand the characteristic of genomes. By the designer, user can design minimal genomes by essential genes which are predicted by our team in this year. It shows the information of essential genes that can exist in eash section like frequency of location on 82 species, function and etc. When it is done to design minimal genome, it can be viewed on Viewer.

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