Team:CBNU-Korea/Notebook

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{{Team:CBNU-Korea/css_new}}
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<div id="template" style="text-align: center; font-weight: bold; font-size: large; color: #f6f6f6; padding: 5px;">
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This is a template page. READ THESE INSTRUCTIONS.
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<div id="instructions" style="text-align: center; font-weight: normal; font-size: small; color: #f6f6f6; padding: 5px;">
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You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2008.igem.org/Help:Template/Examples">HERE</a>.
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You <strong>MUST</strong>  have all of the pages listed in the menu below with the names specified.  PLEASE keep all of your pages within your teams namespace. 
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{| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center"
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.MA {
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!align="center"|[[Team:CBNU-Korea|Home]]
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font-weight: 900;
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!align="center"|[[Team:CBNU-Korea/Team|Team]]
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}
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!align="center"|[https://igem.org/Team.cgi?year=2012&team_name=CBNU-Korea Official Team Profile]
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!align="center"|[[Team:CBNU-Korea/Project|Project]]
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!align="center"|[[Team:CBNU-Korea/Parts|Parts Submitted to the Registry]]
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!align="center"|[[Team:CBNU-Korea/Modeling|Modeling]]
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!align="center"|[[Team:CBNU-Korea/Notebook|Notebook]]
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!align="center"|[[Team:CBNU-Korea/Safety|Safety]]
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!align="center"|[[Team:CBNU-Korea/Attributions|Attributions]]
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You should make use of the calendar feature on the wiki and start a lab notebook. This may be looked at by the judges to see how your work progressed throughout the summer. It is a very useful organizational tool as well.
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<div id="CB_top">
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<div id="CB_top_logo_cont">
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<div id="CB_top_CBNU_logo">
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<div id="CB_top_CBNU_logo_img"></div>
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<div id="CB_top_CBNU_logo_text_1">
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<p>2012 iGEM</p>
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</div>
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<div id="CB_top_CBNU_logo_text_2">
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<p>CBNU-Korea</p>
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</div>
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<div id="CB_top_MENU">
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<ul>
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<li class="HOME"><a
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href="https://2012.igem.org/Team:CBNU-Korea">HOME</a></li>
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<li class="TEAM"><a
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href="https://2012.igem.org/Team:CBNU-Korea/Team">TEAM</a></li>
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<li class="PROJECT"><a
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href="https://2012.igem.org/Team:CBNU-Korea/Project">PROJECT</a></li>
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<li class="NOTEBOOK"><a href="#">NOTEBOOK</a></li>
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</ul>
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<ul>
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<li class="SAFETY"><a
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href="https://2012.igem.org/Team:CBNU-Korea/Safety">SAFETY</a></li>
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<li class="JUDGING"><a
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href="https://2012.igem.org/Team:CBNU-Korea/JG/judging">JUDGING</a></li>
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<li class="iGEM"><a href="https://2012.igem.org/"
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target="_blank">iGEM</a></li>
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</ul>
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<div id="CB_content">
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<div id="CB_subcontent">
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<div id="CB_sub_title">
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<h2>NOTEBOOK</h2>
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<h3>- Notebook</h3>
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</div>
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<div id="CB_sub_menu">
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<div id="CB_sub_mobile_menu">+ MENU</div>
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<ul class="CB_ul">
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<li class="li_NoteBook"><a href="#">01 + NoteBook</a></li>
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<li id="li_sub" class="MA"><a href="#">- March, April</a></li>
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<li id="li_sub" class="MJ"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/2">- May, June</a></li>
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<li id="li_sub" class="July"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/3">- July</a></li>
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<li id="li_sub" class="August"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/4">- August</a></li>
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<li id="li_sub" class="September"><a href="https://2012.igem.org/Team:CBNU-Korea/Notebook/5">- September</a></li>
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</ul>
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<div id="CB_sub_main">
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<div id="CB_sub_img">
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src="https://static.igem.org/mediawiki/2012/6/6e/CBK_overlay_001.png">
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<div id="CB_sub_cont">
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<h1>March - April</h1>
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<h2>March. 26th – April. 1th</h2>
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<p>
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<strong>Tuesday</strong>
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</p>
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<p>
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■CBNU-KOREA team is organized<br> ■Had first meeting<br>
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■Introduced about iGem & previous project of CBNU-KOREA
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</p>
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<p>
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<strong>Thursday</strong>
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</p>
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<p>
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■Planned plan of near future<br> ■(Start -> Find similar gene
 +
comparing sequence by BLAST in 15 species(DEG) -> Certify between
 +
ssential genes and result of BLAST -> Certify if it is equal or
 +
over than 80% -> If it is, adjust to 1500 species.)<br>
 +
■Department of Computer engineering : Planned to study for the
 +
possibilities of the automation of BLAST.<br> ■Department of
 +
Statistics: Planned to calculate probability to be match between
 +
BLAST results and experimently presumed essential genes.<br>
 +
■Department of Microbiology: Planned to study for the database of
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NCBI(Variable of NC file).
 +
</p>
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<p>
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<strong>Friday</strong>
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</p>
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<p>
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■Re-defined the name of the project of this year(BIDOB)<br>
 +
■Planned to presume essential brick using NCBI data.
 +
</p>
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<h2>Apr. 2nd – Apr. 8th</h2>
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<p>
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<strong>Tuesday</strong>
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</p>
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<p>
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■Parsed a data of 15 species in NCBI and built DB for a first
 +
time.<br> ■Made a result of analysis and built it to DB.<br>
 +
■Planned to study to have a understandable reliability(%) on our
 +
analysis.
 +
</p>
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<p>
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<strong>Thursday</strong>
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</p>
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<p>Build DB of NCBI information.</p>
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 +
<p>
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<strong>Friday</strong>
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</p>
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<p>
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■Presumption of Essential Gene : Grouped more than two species and
 +
analyzed characteristic of each genome. Studied a EGGS Site.<br>
 +
■Analysis of location, direction and array of essential gene :
 +
Studied for organization analysis of statistic-biology. Studied
 +
some of research paper.<br> ■Implementing viewer : Planned to
 +
study for JAVA computer language.
 +
</p>
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 +
<p>
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<strong>Saturday</strong>
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</p>
 +
<p>
 +
■Presumption of Essential Gene : Find species-EG by analyzing in
 +
each species.<br> ■Presumption of Essential Gene : Find
 +
Essential gene by analyzing result between species.<br>
 +
■Presumption of Essential Function : Analyze function of each
 +
essential genes.<br> ■Analyzing the array of genes : Analyze
 +
location and array of essential genes and every genes.<br>
 +
■Implement Viewer by built DB.
 +
</p>
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</div>
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</div>
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</div>
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</div>
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<div id="CB_footer">
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<div id="CB_footer_logo"></div>
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<div id="CB_footer_text"></div>
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</html>

Latest revision as of 03:51, 27 September 2012

NOTEBOOK

- Notebook

March - April

March. 26th – April. 1th

Tuesday

■CBNU-KOREA team is organized
■Had first meeting
■Introduced about iGem & previous project of CBNU-KOREA

Thursday

■Planned plan of near future
■(Start -> Find similar gene comparing sequence by BLAST in 15 species(DEG) -> Certify between ssential genes and result of BLAST -> Certify if it is equal or over than 80% -> If it is, adjust to 1500 species.)
■Department of Computer engineering : Planned to study for the possibilities of the automation of BLAST.
■Department of Statistics: Planned to calculate probability to be match between BLAST results and experimently presumed essential genes.
■Department of Microbiology: Planned to study for the database of NCBI(Variable of NC file).

Friday

■Re-defined the name of the project of this year(BIDOB)
■Planned to presume essential brick using NCBI data.

Apr. 2nd – Apr. 8th

Tuesday

■Parsed a data of 15 species in NCBI and built DB for a first time.
■Made a result of analysis and built it to DB.
■Planned to study to have a understandable reliability(%) on our analysis.

Thursday

Build DB of NCBI information.

Friday

■Presumption of Essential Gene : Grouped more than two species and analyzed characteristic of each genome. Studied a EGGS Site.
■Analysis of location, direction and array of essential gene : Studied for organization analysis of statistic-biology. Studied some of research paper.
■Implementing viewer : Planned to study for JAVA computer language.

Saturday

■Presumption of Essential Gene : Find species-EG by analyzing in each species.
■Presumption of Essential Gene : Find Essential gene by analyzing result between species.
■Presumption of Essential Function : Analyze function of each essential genes.
■Analyzing the array of genes : Analyze location and array of essential genes and every genes.
■Implement Viewer by built DB.

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