Team:Bordeaux/Modelling

From 2012.igem.org

(Difference between revisions)
Line 1: Line 1:
-
<html>
+
<html lang="en">
<head>
<head>
-
<title>Home - iGEM Bordeaux 2012</title>
+
<title>Modelling - iGEM Bordeaux 2012</title>
<meta charset="utf-8">
<meta charset="utf-8">
-
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/hackIgem.css" type="text/css" media="all">
 
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/reset.css" type="text/css" media="all">
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/reset.css" type="text/css" media="all">
-
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/styleIgem.css" type="text/css" media="all">
+
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/hackIgem.css" type="text/css" media="all">
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/grid.css" type="text/css" media="all">
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/grid.css" type="text/css" media="all">
 +
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/styleIgem.css" type="text/css" media="all">
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/jquery-ui-1.8.5.custom.css" type="text/css" media="all">
<link rel="stylesheet" href="http://cdjemiel.free.fr/igem2012/css/jquery-ui-1.8.5.custom.css" type="text/css" media="all">
<script type="text/javascript" src="http://cdjemiel.free.fr/igem2012/js/jquery-1.4.2.min.js" ></script>
<script type="text/javascript" src="http://cdjemiel.free.fr/igem2012/js/jquery-1.4.2.min.js" ></script>
Line 12: Line 12:
<script type="text/javascript" src="http://cdjemiel.free.fr/igem2012/js/jquery-ui-1.8.5.custom.min.js"></script>
<script type="text/javascript" src="http://cdjemiel.free.fr/igem2012/js/jquery-ui-1.8.5.custom.min.js"></script>
<!--[if lt IE 9]>
<!--[if lt IE 9]>
-
<script type="text/javascript" src="js/html5.js"></script>
+
<script type="text/javascript" src="http://cdjemiel.free.fr/igem2012/js/html5.js"></script>
<![endif]-->
<![endif]-->
-
 
-
 
</head>
</head>
-
 
-
 
<body>
<body>
-
<style>
 
-
/* getting rid of wiki baggage */
 
-
#globalWrapper{
 
-
    position:relative;
 
-
    width:1073px;
 
-
 
-
}
 
-
 
-
#bodyContent a[href ^="https://"],
 
-
.link-https, #bodyContent a[href ^="mailto:"],
 
-
.link-mailto,
 
-
#bodyContent a[href ^="news://"],
 
-
#bodyContent a[href ^="ftp://"],
 
-
.link-ftp, #bodyContent a[href ^="irc://"],
 
-
.link-irc {
 
-
    background: none;
 
-
    padding-right: 0px;
 
-
}
 
-
 
-
 
-
#content{
 
-
    width:1073px;
 
-
    padding-right:0px;
 
-
    padding-left:0px;
 
-
}
 
-
 
-
#catlinks{
 
-
    display:none;
 
-
}
 
-
 
-
#top-section{
 
-
    border: none;
 
-
    width: 1073px;
 
-
    background-color: #666;
 
-
    display:none;
 
-
    top:0px;
 
-
}
 
-
 
-
#p-logo{
 
-
    display:none;
 
-
}
 
-
 
-
#search-controls{
 
-
    display:none;
 
-
}
 
-
 
-
.firstHeading{
 
-
    display:none;
 
-
}
 
-
 
-
#content{
 
-
    border:none;
 
-
}
 
-
 
-
.left-menu:hover {
 
-
    background-color:transparent;
 
-
    }
 
-
   
 
-
.left-menu, .left-menu a {
 
-
    color:white;
 
-
}
 
-
 
-
.right-menu li {
 
-
    background-color:transparent;
 
-
}
 
-
.right-menu li a {
 
-
    background-color:transparent;
 
-
}
 
-
 
-
.right-menu, .right-menu a {
 
-
    right: 20px;
 
-
}
 
-
 
-
 
-
 
-
#menubar a:visited {
 
-
    color:white;
 
-
    }
 
-
   
 
-
 
-
#menubar a:active {
 
-
    color:white;
 
-
    }
 
-
 
-
#toc{
 
-
    display:none;
 
-
}
 
-
 
-
#footer-box{
 
-
    border:none;
 
-
    border-top: 1px solid #CCC;
 
-
}
 
-
</style>
 
<header>
<header>
<nav>
<nav>
<div class="container">
<div class="container">
<div class="wrapper">
<div class="wrapper">
-
<h1><a href="index.html"><strong>iGEM</strong>Bordeaux 2012</a></h1>
+
<h1><a href="https://2012.igem.org/Team:Bordeaux"><strong>iGEM</strong>Bordeaux 2012</a></h1>
<ul>
<ul>
-
<li><a href="team.html">team</a></li>
+
<li><a href="https://2012.igem.org/Team:Bordeaux/Team">team</a></li>
-
<li><a href="project.html">project</a></li>
+
<li><a href="https://2012.igem.org/Team:Bordeaux/Project">project</a></li>
-
<li><a href="modelling.html">modelling</a></li>
+
<li><a href="https://2012.igem.org/Team:Bordeaux/Modelling" class="current">modelling</a></li>
-
<li><a href="biology.html">biology</a></li>
+
<li><a href="https://2012.igem.org/Team:Bordeaux/Biology">biology</a></li>
-
<li><a href="parteners.html">partners</a></li>
+
<li><a href="https://2012.igem.org/Team:Bordeaux/Partners">partners</a></li>
-
<li><a href="contact.html">contacts</a></li>
+
<li><a href="https://2012.igem.org/Team:Bordeaux/Contacts">contacts</a></li>
</ul>
</ul>
</div>
</div>
</div>
</div>
</nav>
</nav>
 +
<section class="adv-content">
 +
<div class="container">
 +
<ul class="breadcrumbs">
 +
<li>Modelling</li>
 +
</ul>
 +
</div>
 +
</section><div class="ic"></div>
 +
</header>
 +
<section id="content">
 +
<div class="middle">
 +
<div class="container">
 +
<div class="wrapper">
 +
<div class="grid3 first">
 +
<ul class="categories">
 +
<li><a href="https://2012.igem.org/Team:Bordeaux/OverviewModelling">Overview</a></li>
 +
<li><a href="https://2012.igem.org/Team:Bordeaux/IntroductionModelling">Introduction</a></li>
 +
<li><a href="https://2012.igem.org/Team:Bordeaux/ConceptionModelling">Conception</a></li>
 +
<li><a href="https://2012.igem.org/Team:Bordeaux/RealisationModelling">Realisation</a></li>
 +
<li><a href="https://2012.igem.org/Team:Bordeaux/ConclusionModelling">Conclusion</a></li>
 +
 +
</ul>
 +
</div>
 +
<div class="grid9">
 +
<h2>iGEM - Bordeaux - Bioinformatics</h2>
 +
<div class="img-box">
 +
<figure><img src="images/model.gif" alt=""></figure>
 +
<p>Our project aims at reproducing multicellular-like behavior in the bacteria Escherichia coli. The idea came from the patterns visible on some animals, like the “pseudo-eyes” on a butterfly wing. As well, we thought about the formation of stripes on tigers or zebra. Such patterns are created thanks to a very precise genetic regulation. So what we want to do here is modeling a regulation mechanism existing in eukaryotes in a simple organism. The bacteria will share the same DNA but should be able to display a different phenotype depending on the signal received by its neighbors. The phenotype here will be the expression of three different colors. The bacteria should be able to communicate between them. A light signal is used as the first inducer of our mechanism. Then, the first cells activated by the input signal send a signal to its neighbor that will react to it by changing its color, and sending another message to the next cell. This will allow us to draw different patterns on the petri dish. </p>
 +
</div>
 +
<p><a href="#" target="_blanck" class="more">Read More</a></p>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
<div class="bottom">
 +
<div class="container">
 +
<div class="wrapper">
 +
<div class="grid3 first">
 +
<h3>Partners</h3>
 +
<ul class="list1">
 +
<li><a href="http://ambafrance-us.org/spip.php?article415" title="Mst" target="_blank">AmbaFrance-us</a></li>
 +
<li><a href="http://www.labri.fr/" title="LaBRI" target="_blank">LaBRI</a></li>
 +
<li><a href="http://www.thermoscientific.com/" title="Thermo_scientific" target="_blank">Thermo Scientific</a></li>
 +
</ul>
 +
</div>
 +
<div class="grid3">
 +
<h3>Project</h3>
 +
<ul class="list2">
 +
<li><a href="#">Overview</a></li>
 +
<li><a href="#">Introduction</a></li>
 +
<li><a href="#">Biobricks</a></li>
 +
</ul>
 +
</div>
 +
<div class="grid3">
 +
<h3>Others</h3>
 +
<ul class="list2">
 +
<li><a href="#">Other</a></li>
 +
</ul>
 +
</div>
 +
<div class="grid3">
 +
<div id="datepicker"></div>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
</section>
 +
<footer>
 +
<div class="container">
 +
<div class="wrapper">
 +
<div class="copy">iGEM Bordeaux Team (c) 2012 |</div>
 +
<address class="phone">
 +
You can contact us by email or phone :
 +
<strong>
 +
<a href="mailto:igem-bordeaux2-2012@googlegroups.com">igem-bordeaux2-2012@googlegroups.com</a> or +33(0)5 4000 8404
 +
</strong>
 +
</address>
 +
</div>
 +
</div>
 +
</footer>
 +
<script type="text/javascript">
 +
$(document).ready(function() {
 +
$('.pics').cycle({
 +
fx: 'toss',
 +
next: '#next',
 +
prev: '#prev'
 +
});
 +
 +
// Datepicker
 +
$('#datepicker').datepicker({
 +
inline: true
 +
});
 +
 +
});
 +
</script>
</body>
</body>
 +
</html>

Revision as of 07:36, 21 July 2012

Modelling - iGEM Bordeaux 2012

iGEM - Bordeaux - Bioinformatics

Our project aims at reproducing multicellular-like behavior in the bacteria Escherichia coli. The idea came from the patterns visible on some animals, like the “pseudo-eyes” on a butterfly wing. As well, we thought about the formation of stripes on tigers or zebra. Such patterns are created thanks to a very precise genetic regulation. So what we want to do here is modeling a regulation mechanism existing in eukaryotes in a simple organism. The bacteria will share the same DNA but should be able to display a different phenotype depending on the signal received by its neighbors. The phenotype here will be the expression of three different colors. The bacteria should be able to communicate between them. A light signal is used as the first inducer of our mechanism. Then, the first cells activated by the input signal send a signal to its neighbor that will react to it by changing its color, and sending another message to the next cell. This will allow us to draw different patterns on the petri dish.

Read More