http://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&feed=atom&action=historyTeam:Bielefeld-Germany/Results/Datapage - Revision history2024-03-28T20:13:09ZRevision history for this page on the wikiMediaWiki 1.16.0http://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=293974&oldid=prevRbraun: /* Data for our favorite new parts */2012-10-27T01:07:25Z<p><span class="autocomment">Data for our favorite new parts</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==Data for our favorite new parts==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==Data for our favorite new parts==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>K863000</partinfo> - '''bpul (laccase from ''Bacillus pumilus'') with T7 promoter, RBS and His-tag''': This part is used to overexpress the laccase bpul for further purification followed by characterization of enzyme activity and substrate specificity.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>K863000</partinfo> - '''bpul (laccase from ''Bacillus pumilus'') with T7 promoter, RBS and His-tag''': This part is used to overexpress the laccase bpul for further purification followed by characterization of enzyme activity and substrate specificity.</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div># <partinfo>K863005</partinfo> - '''ecol (laccase from ''E. coli'') with T7 promoter, RBS and His-tag''': This enzyme is overexpressed after induction and can be purified <del class="diffchange diffchange-inline">by </del>His-tag. Subsequently the laccase can be characterized regarding to enzyme activity and substrate specificity.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div># <partinfo>K863005</partinfo> - '''ecol (laccase from ''E. coli'') with T7 promoter, RBS and His-tag''': This enzyme is overexpressed after induction <ins class="diffchange diffchange-inline">with rhamnose </ins>and can be purified <ins class="diffchange diffchange-inline">using its </ins>His-tag. Subsequently the laccase can be characterized regarding to <ins class="diffchange diffchange-inline">its </ins>enzyme activity and substrate specificity.</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div># <partinfo>K863204</partinfo> - '''shuttle vector pECPP11JS for site-directed recombination of genes of interest in yeast''': With this part the production and secretion of a protein of interest like laccase is possible.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div># <partinfo>K863204</partinfo> - '''shuttle vector pECPP11JS for site-directed recombination of genes of interest in yeast''': With this part the production and secretion of a protein of interest like <ins class="diffchange diffchange-inline">our </ins>laccase is possible<ins class="diffchange diffchange-inline">. Protein expression is induced with methanol, selection is performed by complementation of its histidine auxotrophy</ins>.</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==We have also characterized the following parts==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==We have also characterized the following parts==</div></td></tr>
</table>Rbraunhttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=293866&oldid=prevRbraun: /* How our BioBricks work */2012-10-27T01:02:18Z<p><span class="autocomment">How our BioBricks work</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== How our BioBricks work===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== How our BioBricks work===</div></td></tr>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to <del class="diffchange diffchange-inline">radicalize </del>and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, three expression systems were used: ''Escherichia coli '' KRX and Rosetta-Gami and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept <del class="diffchange diffchange-inline">could </del>be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' <ins class="diffchange diffchange-inline">The </ins>iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to <ins class="diffchange diffchange-inline">oxidize </ins>and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, three expression systems were used: ''Escherichia coli '' KRX and Rosetta-Gami <ins class="diffchange diffchange-inline">2 </ins>and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads <ins class="diffchange diffchange-inline">(Controlled Pore Carrier) </ins>or by fusing the enzymes to cellulose binding domains. The concept <ins class="diffchange diffchange-inline">can </ins>be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td></tr>
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</table>Rbraunhttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=292615&oldid=prevKorates: /* How our BioBricks work */2012-10-27T00:00:33Z<p><span class="autocomment">How our BioBricks work</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== How our BioBricks work===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== How our BioBricks work===</div></td></tr>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to radicalize and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, three expression systems <del class="diffchange diffchange-inline">are </del>used: ''Escherichia coli '' KRX and Rosetta-Gami and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept could be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to radicalize and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, three expression systems <ins class="diffchange diffchange-inline">were </ins>used: ''Escherichia coli '' KRX and Rosetta-Gami and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept could be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td></tr>
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</table>Korateshttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=292597&oldid=prevKorates: /* How our BioBricks work */2012-10-26T23:59:55Z<p><span class="autocomment">How our BioBricks work</span></p>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to radicalize and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, <del class="diffchange diffchange-inline">two </del>expression systems are used: ''Escherichia coli'' and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept could be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to radicalize and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, <ins class="diffchange diffchange-inline">three </ins>expression systems are used: ''Escherichia coli '' <ins class="diffchange diffchange-inline">KRX and Rosetta-Gami </ins>and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept could be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td></tr>
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</table>Korateshttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=292502&oldid=prevIsahu: /* We have also characterized the following parts */2012-10-26T23:55:40Z<p><span class="autocomment">We have also characterized the following parts</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863012</partinfo> - '''tthl laccase (from ''T. thermophilus'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of tthl for further purification followed by characterization of enzyme activity and substrate specificity.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863012</partinfo> - '''tthl laccase (from ''T. thermophilus'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of tthl for further purification followed by characterization of enzyme activity and substrate specificity.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863022</partinfo> - '''bhal laccase (''from Bacillus halodurans'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of bhal for further purification followed by characterization of enzyme activity and substrate specificity.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863022</partinfo> - '''bhal laccase (''from Bacillus halodurans'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of bhal for further purification followed by characterization of enzyme activity and substrate specificity.</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div># <partinfo>BBa_K863207</partinfo> - '''shuttle vector pECPP11JS for site-directed recombination of TVEL5 laccase in yeast: With this part the production and secretion of TVEL5 is possible. </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div># <partinfo>BBa_K863207</partinfo> - '''shuttle vector pECPP11JS for site-directed recombination of TVEL5 laccase in yeast:<ins class="diffchange diffchange-inline">''' </ins>With this part the production and secretion of TVEL5 is possible. </div></td></tr>
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</table>Isahuhttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=292493&oldid=prevIsahu: /* We have also characterized the following parts */2012-10-26T23:55:24Z<p><span class="autocomment">We have also characterized the following parts</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863012</partinfo> - '''tthl laccase (from ''T. thermophilus'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of tthl for further purification followed by characterization of enzyme activity and substrate specificity.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863012</partinfo> - '''tthl laccase (from ''T. thermophilus'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of tthl for further purification followed by characterization of enzyme activity and substrate specificity.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863022</partinfo> - '''bhal laccase (''from Bacillus halodurans'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of bhal for further purification followed by characterization of enzyme activity and substrate specificity.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div># <partinfo>BBa_K863022</partinfo> - '''bhal laccase (''from Bacillus halodurans'') with constitutive promoter J23100, RBS and His-tag''': This part is used for the constitutive expression of bhal for further purification followed by characterization of enzyme activity and substrate specificity.</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline"># <partinfo>BBa_K863207</partinfo> - '''shuttle vector pECPP11JS for site-directed recombination of TVEL5 laccase in yeast: With this part the production and secretion of TVEL5 is possible. </ins></div></td></tr>
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</table>Isahuhttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=292336&oldid=prevJuvoss: /* How our BioBricks work */2012-10-26T23:48:14Z<p><span class="autocomment">How our BioBricks work</span></p>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|<del class="diffchange diffchange-inline"><div style="text-align:justify;"></del>'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to radicalize and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, two expression systems are used: ''Escherichia coli'' and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept could be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[File:Bielefeld2012 Overview.jpg|900px|thumb|center|'''Figure 1:''' iGEM Team Bielefeld is developing a biological filter using immobilized laccases, enzymes able to radicalize and break down a broad range of aromatic substances. For the production of laccases from different bacteria, fungi and plants, two expression systems are used: ''Escherichia coli'' and the yeast ''Pichia pastoris''. Immobilization is carried out either by using CPC-silica beads or by fusing the enzymes to cellulose binding domains. The concept could be extended to other toxic pollutants in drinking and wastewater, as well as to industrial applications in paper and textile industries or even for bioremediation of contaminated soil.</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==Data for our favorite new parts==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==Data for our favorite new parts==</div></td></tr>
</table>Juvosshttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=276022&oldid=prevJuvoss at 14:34, 24 October 20122012-10-24T14:34:30Z<p></p>
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</table>Juvosshttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=276021&oldid=prevJuvoss at 14:34, 24 October 20122012-10-24T14:34:04Z<p></p>
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</table>Juvosshttp://2012.igem.org/wiki/index.php?title=Team:Bielefeld-Germany/Results/Datapage&diff=274461&oldid=prevJuvoss at 10:25, 23 October 20122012-10-23T10:25:33Z<p></p>
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