Team:Bielefeld-Germany/Labjournal/week5

From 2012.igem.org

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==Week 5 (05/28 - 06/03/12)==
 
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===Monday May 28th===
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* '''Team bacterial laccase''': Restriction of ''E. coli'' CueO, ''Xanthomonas campestris'' CopA and the ''B. pumilus'' laccase CotA and the pSB1C3 + RFP plasmid with the same restriction enzymes, ligation of the digested products and transformation in E.coli KRX cells.
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** Since we have less CopA and Tth-laccase DNA, we set an PCR from the remaining PCR approach. For the reaction look [https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week1 PCR table]
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===Tuesday May 29th===
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/Starting"><strong>Prologue</strong></a></li>
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                <li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week1"><strong>Week 1</strong></a></li>
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                <li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week2"><strong>Week 2</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week3"><strong>Week 3</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week4"><strong>Week 4</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week5"><strong>Week 5</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week6"><strong>Week 6</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week7"><strong>Week 7</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week8"><strong>Week 8</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week9"><strong>Week 9</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week10"><strong>Week 10</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week11"><strong>Week 11</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week12"><strong>Week 12</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week13"><strong>Week 13</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week14"><strong>Week 14</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week15"><strong>Week 15</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week16"><strong>Week 16</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week17"><strong>Week 17</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week18"><strong>Week 18</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week19"><strong>Week 19</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week20"><strong>Week 20</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week21"><strong>Week 21</strong></a></li>
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<li><a href="https://2012.igem.org/Team:Bielefeld-Germany/Labjournal/week22"><strong>Week 22</strong></a></li>
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*'''Team Student Academy:''' ''E. coli'' Mach1 with pMTE cp46 His received from the working group “Fermentation Engineering”, University Bielefeld. Plasmid contains genes for GFP and kanamycine resistance. We plated it and made a liquid culture at 30°C. Result: There was an intense fluorescence. We made a glycerol stock  and a plasmid isolation.
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*'''Team Bacterial Laccases:''' We made colony PCRs on the transformations from the day before. We got product for every transformation approach so we plated the positive colonies on new plates to make plasmid isolation. So hopefully in some days we have the plasmids with the ''E. coli'' laccase, the ''Xanthomonas campestris'' laccase and the ''B. pumilus'' laccase with the inducible t7 promotor and a HIS-tag.
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===Wednesday May 30th===
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==Week 5 (05/28 - 06/03/12)==
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*'''Team Bacterial Laccases:''' After plasmid isolation we cut our plasmids with ''Not''I to see if the colony PCR was correct and our laccases are in the backbone. The agarose gel showed that for all of the different plasmids we had at least one plasmid with DNA band on the correct hight in agarose gel.
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===Thursday May 31st===
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* '''Team bacterial laccase''': We sent the isolated pSB1C3 plasmids with inducible T7 promotor, the different laccase genes from ''Xanthomonas campestris'' CopA, ''B. pumilus'' CotA and ''E.coli'' CueO and HIS-Tag for sequencing.
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===Friday June 1st===
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===Saturday June 2nd===
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===Sunday June 3rd===
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* '''Team Bacterial Laccases''':
 
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** PCRs of genomic DNA from ''B. halodurans C-125'' we ordered from DSMZ before. We handled the cells in the same way we did with ''T. thermphilus'' before and soluted the lyophlized cells in water and boiled them before PCR. After PCR we cleaned up the product. However the DNA amount was so low that we had to do the PCRs again.
 
{{Team:Bielefeld/Sponsoren}}
{{Team:Bielefeld/Sponsoren}}

Latest revision as of 21:14, 25 September 2012


Week 5 (05/28 - 06/03/12)

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