Team:Johns Hopkins-Software/Compatibility
From 2012.igem.org
(Difference between revisions)
Line 16: | Line 16: | ||
<p> | <p> | ||
Using biojava and libSBOLj libraries, Autogene is capable of importing and exporting genetic sequences in the following file formats:<br> | Using biojava and libSBOLj libraries, Autogene is capable of importing and exporting genetic sequences in the following file formats:<br> | ||
- | + | <div style="padding-left:10px"> | |
- | + | ||
- | + | ||
<ul> | <ul> | ||
<li>FASTA</li> | <li>FASTA</li> | ||
Line 24: | Line 22: | ||
<li>SBOL</li> | <li>SBOL</li> | ||
</ul> | </ul> | ||
- | + | </div> | |
<br> | <br> | ||
*The genbank files Autogene can import/export are also ApE compatible. <a href="http://biologylabs.utah.edu/jorgensen/wayned/ape/">ApE </a> (A plasmid Editor) is a synthetic biology tool that outputs files in a unique genbank format that contains information on annotation color. | *The genbank files Autogene can import/export are also ApE compatible. <a href="http://biologylabs.utah.edu/jorgensen/wayned/ape/">ApE </a> (A plasmid Editor) is a synthetic biology tool that outputs files in a unique genbank format that contains information on annotation color. |