Team:EPF-Lausanne/References

From 2012.igem.org


Contents

Fussenegger 2011

A synthetic optogenetic transcription device enhances blood-glucose homeostasis in mice.

Ye H, Baba M, Peng R-W, Fussensgger M.

Science, 2011 Vol. 332 no. 6037 pp. 1565-1568 URL

Strickland 2008

Light-activated DNA binding in a designed allosteric protein

Devin Strickland, Keith Moffat, and Tobin R. Sosnick

PNAS, 2008 vol. 105 no. 31 10709-10714 URL

Kasahara 2002

Photochemical Properties of the Flavin Mononucleotide-Binding Domains of the Phototropins from Arabidopsis, Rice, and Chlamydomonas reinhardtii.

Masahiro Kasahara, Trevor E. Swartz, Margaret A. Olney, Akihiko Onodera, Nobuyoshi Mochizuki, Hideya Fukuzawa, Erika Asamizu, Satoshi Tabata, Hiromi Kanegae, Makoto Takano, John M. Christie, Akira Nagatani, and Winslow R. Briggs.

Plant Physiol 2002 June; 129(2): 762–773. URL

Salomon 2000

Photochemical and Mutational Analysis of the FMN-Binding Domains of the Plant Blue Light Receptor, Phototropin.

Michael Salomon, John M. Christie, Elke Knieb, Ulrika Lempert and Winslow R. Briggs.

Biochemistry 2000 39 (31), 9401-9410 URL

Yao 2008

Estimation of the available free energy in a LOV2-J alpha photoswitch.

Xiaolan Yao, Michael K. Rosen, and Kevin H. Gardner

Nat Chem Biol. 2008; 4(8): 491–497. URL

Eitoku 2005

Conformational Dynamics of Phototropin 2 LOV2 Domain with the Linker upon Photoexcitation.

Takeshi Eitoku , Yusuke Nakasone , Daisuke Matsuoka , Satoru Tokutomi and Masahide Terazima

J. Am. Chem. Soc., 2005, 127 (38), pp 13238–13244 URL

Marchesini 1989

Effect of low-energy laser irradiation on colony formation capability in different human tumor cells in vitro.

Marchesini R, Dasdia T, Melloni E, Rocca E.

Lasers Surg Med. 1989;9(1):59-62. URL


Hockberger 1999

Activation of flavin-containing oxidases underlies light-induced production of H2O2 in mammalian cells.

Hockberger PE, Skimina TA, Centonze VE, Lavin C, Chu S, Dadras S, Reddy JK, White JG.

Proc Natl Acad Sci USA. 1999 May 25;96(11):6255-60. URL


Darzacq 2007

In vivo dynamics of RNA polymerase II transcription

Xavier Darzacq, Yaron Shav-Tal1, Valeria de Turris, Yehuda Brody, Shailesh M Shenoy, Robert D Phair and Robert H Singer.

Nature Structural & Molecular Biology. 2007; 14, 796 - 806 URL

Schwanhausser 2011

Global quantification of mammalian gene expression control.

Schwanhäusser B, Busse D, Li N, Dittmar G, Schuchhardt J, Wolf J, Chen W, Selbach M.

Nature. 2011 May 19;473(7347):337-42. URL

Hendrik 2005

Structural Properties of the Promiscuous VP16 Activation Domain.

Hendrik R. A. Jonker , Rainer W. Wechselberger , Rolf Boelens , Gert E. Folkers , and Rob Kaptein

Biochemistry, 2005, 44 (3), pp 827–839 URL

Yang 1996

In vivo and in vitro Studies of TrpR-DNA Interactions.

Jie Yang, Angelo Gunasekera, Teresa A. Lavoie, Lihua Jin, Dale E. A. Lewis and Jannette Carey

J. Mol. Biol. 1996 258, 37–52 URL

Jin 1993

Thermodynamics of ligand binding to trp repressor.

Lihua Jin, Jie Yang, Jannette Carey

Biochemistry, 1993, 32 (28), pp 7302–7309 URL

Sadowski 1988

GAL4-VP16 is an unusually potent transcriptional activator.

Sadowski I, Ma J, Triezenberg S, Ptashne M.

Nature. 1988 Oct 6;335(6190):563-4. URL

Cohen 2009

Quantification of Plasmid DNA Copies in the Nucleus after Lipoplex and Polyplex Transfection.

Richard N. Cohen, Marieke A.E.M. van der Aa, Nichole Macaraeg, Ai Ping Lee and Francis C. Szoka, Jr.

J Control Release. 2009 April 17; 135(2): 166–174. URL